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SCN18_25_8_15_R1_B_scaffold_3779_4

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(3770..4204)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Microbacterium sp. TS-1 RepID=U2YR96_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 144.0
  • Bit_score: 284
  • Evalue 3.70e-74
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 144.0
  • Bit_score: 284
  • Evalue 1.10e-74
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 144.0
  • Bit_score: 284
  • Evalue 5.20e-74

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
CAGATGTTGCAGGACCTGGGTCGAGAGCCCACGCCCGAGGAGCTGAGCCGCGAGCTCGACATGACGCCCGAGAAGGTCGTCGAGGTGCAGAAGTACGGCCGTGAGCCCATCTCGCTGCACACGCCGCTCGGCGAGGACGGCGACAGTGAGTTCGGCGACCTGATCGAGGACACCGAGGCGGTCGTCCCCGCCGACGCGGTCGGATTCACGATGCTCCAGCGCCAGCTGGAGTCGCTTCTGGACTCGCTCAGCGAGCGCGAGGCCGGCGTGATCCGGATGCGTTTCGGTCTCGGCGACGGTCAGCCCAAGACGCTCGACCAGATCGGCGACACGTTCGGCGTGACCCGTGAGCGCATCCGTCAGATCGAGTCGAAGACGATGGCGAAGCTTCGTCACCCTAGTCGCTCGCAGTCGCTCCGGGATTACCTCGAGTGA
PROTEIN sequence
Length: 145
QMLQDLGREPTPEELSRELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLESLLDSLSEREAGVIRMRFGLGDGQPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE*