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SCN18_25_8_15_R1_B_scaffold_6332_3

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 1748..2662

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361AD79 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 308.0
  • Bit_score: 434
  • Evalue 4.70e-119
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 308.0
  • Bit_score: 433
  • Evalue 2.50e-118
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 305.0
  • Bit_score: 416
  • Evalue 4.90e-114

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 915
GTGACCGCAGGCACGAAGACCACCACCCGCTCCACCACGAAGGACACCGTCGTAGACGACGCCGAAGTGGTCGAGGCCGCGACGGCGAAGCGCCCGGCGCGCAAGCCCGCCGCGGCGAAGACCGCGACCAAGAAGGCGGCGCCCAAGGCGGACGCGAAGGGCGCGGTCACCGAAGACGACGACATCGAGCTGGACGACGACCTCGACGTCGCGGATGTCGAGATCGACGACGTCGATGTGGATGCCGACGACAGCGACGACGACACGGACGCGGCGACGCCCGCGAAGAAGAAGGCGGCGGCGCCGGCCGATCCGGAGTCTTCCGACGATGAAGAGGACGACGAGGAGGAGGCCAAGCCGGCGTTCACGGAGCCTCTGCCCACCGGCGCCATCGTCATCTCGTCGAACGACGAGGATGACGTCCCGGTCTACTCCGCACAGATCACGGGCGCAACAGCAGACCCGGTGAAGGACTACCTGAAGCAGATCGGCAAGGTCCCGCTTCTGAACGCGGCCGAAGAGGTCGAACTCGCGATGCGCATCGAGGCCGGCCTGTTCGCCGAGGAGAAGCTGTCGCACATGTCCGCGGCGGAGAAGGCGACGCAGCTCGGCCTCGACCTCCAGTGGGTCGCGCGCGACGGTCAGCGAGCGAAGTCTCACCTGCTCGGCGCGAACCTCCGACTGGTCGTGTCGCTCGCAAAGCGGTACACGGGTCGTGGCATGCAGTTCCTGGATCTGATCCAGGAAGGAAACCTCGGACTCATCCGTGCTGTCGAGAAGTTCGACTACACCAAGGGCTTCAAGTTCTCCACCTACGCGACGTGGTGGATTCGCCAGGCGATCACCCGTGCGATGGCGGACCAGGCGCGGACGATCCGCATCCCGGTCCACATGGTCGAGGTCATCAACAAGCTC
PROTEIN sequence
Length: 305
VTAGTKTTTRSTTKDTVVDDAEVVEAATAKRPARKPAAAKTATKKAAPKADAKGAVTEDDDIELDDDLDVADVEIDDVDVDADDSDDDTDAATPAKKKAAAPADPESSDDEEDDEEEAKPAFTEPLPTGAIVISSNDEDDVPVYSAQITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEAGLFAEEKLSHMSAAEKATQLGLDLQWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKL