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SCN18_25_8_15_R1_B_scaffold_8337_2

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(359..748)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B30296 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 125.0
  • Bit_score: 108
  • Evalue 3.30e-21
TetR family transcriptional regulator {ECO:0000313|EMBL:KHK99874.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 123.0
  • Bit_score: 105
  • Evalue 5.10e-20
putative TetR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 125.0
  • Bit_score: 104
  • Evalue 1.70e-20

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GTGGCGGCGACCGTCGGGGACCTGGCGCTGCGGATGAACGCGACGCGCAGTGAGCCCGATCCCCGTGTGCGATTGATCGCGCAGGCCGACGCCCTGCGCGCGTTCGCGCACGAGCAGCCGGTCGGCTTCTCGCTCGTCTTCGCCGCGCACGGGGCGCCGCGGGTCGAGCCGAGCGCCGTCGCGGGAAGTGTGGCACCCCTCCTCGACGCGGTGACCGAGCTCACCGGGCCCGAGCATGCGCTCGATGGAGCCCGGCTCCTCACGGCGTGGGCGAACGGCTTCATCACGATGGAGCTGGGGGGCACGCTCCGGATGGGCGGCGACATCGATGCGGCATGGCGCTGGGGGCTCGACCGGATCGTCTCCGCCCTGGACCGCCCGTCGGCGTGA
PROTEIN sequence
Length: 130
VAATVGDLALRMNATRSEPDPRVRLIAQADALRAFAHEQPVGFSLVFAAHGAPRVEPSAVAGSVAPLLDAVTELTGPEHALDGARLLTAWANGFITMELGGTLRMGGDIDAAWRWGLDRIVSALDRPSA*