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SCN18_25_8_15_R1_B_scaffold_9641_2

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 1113..1814

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000370D05E similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 226.0
  • Bit_score: 407
  • Evalue 6.10e-111
Transcriptional regulator {ECO:0000313|EMBL:KEP75706.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 226.0
  • Bit_score: 399
  • Evalue 3.10e-108
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 226.0
  • Bit_score: 397
  • Evalue 2.40e-108

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGAAGGACGAACGCGTTCATATGACCTCACGGATCCTGGTTGTCGACGATGACACAGCCCTCGCCGAGATGATCGGCATCGTGCTGCGCACCGAGGGCTTCGAGACGGCCTTCTGCCCCGACGGCGAGAAGGCCGTCGACATCTGGCGGACGGAGCGCCCCGACCTCGTTCTGCTCGATCTGATGCTGCCCGGAGTGGACGGCATCGAGATCTGCACGCGCATCCGCGCGGAGTCGGGTGTGCCCATCATCATGCTCACGGCGCGCACGGACACGGCGGACGTCGTGAAGGGCCTCGAGTCCGGAGCGGACGACTACATGGTCAAGCCGTTCAACCCGAAGGAGCTGGTGGCACGCATCCGGACCCGTCTGCGGCCGAGCGCGCAGACCGCGGCGGAGATCCTCCGGATCGGGGACCTCGCGGTGGATGTCGTCGCGCACGAGGTCCGCAGGGGCGACGGGTCGATCGCGCTGACGCCGCTCGAGTTCGAGCTGCTGGTGGCGCTCGCCTCCAAGCCGCAGCAGGTCTTCTCCCGCGAGATGCTCCTCGAGCAGGTGTGGGGCTACCACTACAAGGCCGACACCCGGCTGGTGAACGTGCACGTCCAGCGTCTGCGGGCGAAGGTCGAGCAGGACCCCGACAATCCGAAGATCGTGACCACCGTGCGCGGCGTGGGGTACCGCGCCGGCGCCGCCGTCTGA
PROTEIN sequence
Length: 234
MKDERVHMTSRILVVDDDTALAEMIGIVLRTEGFETAFCPDGEKAVDIWRTERPDLVLLDLMLPGVDGIEICTRIRAESGVPIIMLTARTDTADVVKGLESGADDYMVKPFNPKELVARIRTRLRPSAQTAAEILRIGDLAVDVVAHEVRRGDGSIALTPLEFELLVALASKPQQVFSREMLLEQVWGYHYKADTRLVNVHVQRLRAKVEQDPDNPKIVTTVRGVGYRAGAAV*