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SCN18_25_8_15_R1_B_scaffold_12680_1

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(141..1127)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor NusA n=1 Tax=Microbacterium yannicii RepID=UPI0002FE1606 similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 328.0
  • Bit_score: 603
  • Evalue 8.20e-170
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 328.0
  • Bit_score: 591
  • Evalue 5.90e-166
nusA; transcription elongation factor similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 328.0
  • Bit_score: 565
  • Evalue 9.20e-159

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Taxonomy

CN-SCN_Microbacterium_27x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 987
GTGGATATCGATCTGGGACTGCTGCGAACGGTCGAGCGCGAGAGGGAGATCCCTTTCGAGGAGCTCGTGGCGATCATCGAGCAGGCGATCCTGACCGCCTATGCCAAGCACACCTCGCCGACCGGCACCCTTCCCGACGGCGCCCGCGCCGAGCTCGACCGCAAGACCGGCCACGTCGCGGTCTTCGTGCCGCTCCTCGACGATGAGGGGGCCGTCATCGGCGAGGAGGAGAGCACCCCCGAGGACTTCGGCCGCATCGCCGCGTTCGCCGCGAAGCAGGTGATCAGTCAGCGCCTGCGGGACATCGCCGACGACGCCGTGCTCGGTGAGTTCCGGGGCAAGGACGGCGACATCGTCGCGGGGGTCGTCCAGCAGGGGCCGAATCCCCGCATGGTGCACGTCGACCTCGGCTCGGTCGAGGCGATCCTCCCGCCCGAGGAACAGGTCGCGGGGGAGGAGTATCCGCACGGATCGCGCCTCCGCGTCTACGTCACGTCGGTCGCCAAGGGCGCGAAGGGGCCTTCGATCACGGTGTCGCGCACCCACCCGGGACTCGTCCGCAAGCTGTTCGCCCTCGAGGTCCCCGAGATCGCGAACGGCCTGGTCGAGATCGTCGCGTTGGCCCGCGAGGCCGGACACCGCACCAAGATCGCGGTCAAGGCCAACGACCCGTCGATCAACGCGAAGGGGGCGTGCATCGGCGAGCTCGGGCGCCGGGTCCGGGCCGTGACCGAGGAGCTCGGCGGGGAGAAGATCGACATCGTCGACTACGACCCGGAACTGGCGAAGTTCGTCGCCAACGCGCTGTCGCCCGCGAAGGTGACCTCCAGCTTCATCCTGGATGCCTCGAGCAAGGCCGTCCGGGCCCTCGTGCCGGACTACCAGCTGTCCCTCGCGATCGGCAAGGAGGGGCAGAACGCCCGTCTCGCAGCGAAGCTGACCGGCGCGAAGATCGACATCCAGCCGGACAGCATCCTTGAGTCCTAG
PROTEIN sequence
Length: 329
VDIDLGLLRTVEREREIPFEELVAIIEQAILTAYAKHTSPTGTLPDGARAELDRKTGHVAVFVPLLDDEGAVIGEEESTPEDFGRIAAFAAKQVISQRLRDIADDAVLGEFRGKDGDIVAGVVQQGPNPRMVHVDLGSVEAILPPEEQVAGEEYPHGSRLRVYVTSVAKGAKGPSITVSRTHPGLVRKLFALEVPEIANGLVEIVALAREAGHRTKIAVKANDPSINAKGACIGELGRRVRAVTEELGGEKIDIVDYDPELAKFVANALSPAKVTSSFILDASSKAVRALVPDYQLSLAIGKEGQNARLAAKLTGAKIDIQPDSILES*