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SCN18_25_8_15_R1_B_scaffold_9775_4

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 1038..1418

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=2 Tax=Microbacterium RepID=H8E4Z9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 126.0
  • Bit_score: 237
  • Evalue 4.60e-60
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 126.0
  • Bit_score: 240
  • Evalue 1.30e-60
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 123.0
  • Bit_score: 226
  • Evalue 2.30e-57

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCACGTCTCGCCGGCGTCGACATCCCGCGCGACAAGCGCGTGGTCATCGCCCTGACCTACATCTACGGCATCGGCCGTACCCGCTCGAACGAGATCCTCAAGGCGACGGAGATCGACGAGAACATCCGCGTCAAGGACCTGACCGATGACCAGCTCATCGCGCTCCGCGACCACATCGAGGGCACCTACAAGGTGGAGGGTGACCTGCGCCGCGAGGTCGCCGCAGACATCCGCCGCAAGGTCGAGATCGGCTCGTACGAGGGCATCCGCCACCGTCGCGGCCTTCCCGTGCGCGGCCAGCGCACCAAGACGAACGCTCGCACCCGCAAGGGCCCGAAGCGCACCGTCGCCGGCAAGAAGAAGGCCGGCCGCAAGTAA
PROTEIN sequence
Length: 127
MARLAGVDIPRDKRVVIALTYIYGIGRTRSNEILKATEIDENIRVKDLTDDQLIALRDHIEGTYKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVRGQRTKTNARTRKGPKRTVAGKKKAGRK*