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SCN18_26_2_15_R5_F_scaffold_402_9

Organism: SCN18_26_2_15_R5_F_SCN_Thiomonas_15x_64_14

near complete RP 37 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(7494..10499)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 1001.0
  • Bit_score: 1915
  • Evalue 0.0
Ribonuclease E n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4U1_THIK1 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 1001.0
  • Bit_score: 1915
  • Evalue 0.0
Rne/Rng family ribonuclease similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 1001.0
  • Bit_score: 1915
  • Evalue 0.0

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Taxonomy

SCN_Thiomonas_15x → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3006
ATGAAACGCATGTTGTTCAACGCCACGCAGTCGGAAGAATTGCGCGTGGCCATCGTCGATGGACAGAAACTTCTCGACATCGATATCGAACAGGCCGGGCGCGAGCAGCGCAAGGGCAATATCTACAAGGCCGTCGTCACCCGCGTCGAGCCCTCGCTCGAAGCCTGTTTCGTCGACTACGGCGAAGAGCGCCACGGTTTTTTGCCGTTCAAGGAAATTTCGCGCCAGTACTTCAAGGAAGGCGTGTCTCCGTCGCAGGCGCGCATTCAGGACGTGATCACCGAAGGCCAGCAACTGCTGGTGCAGGTGGAAAAAGAAGAGCGCGGCAACAAGGGCGCGGCGCTGACCACCATCATCTCGCTGGCCGGGCGCTATCTGGTGCTCATGCCCAACAATCCGCGCGGCGGTGGCGTGAGCCGTCGCATCGAGGGTGAAGACCGCCAGGAACTGCGCGAGACGATGGACCAGCTCCAGCATCCCGAAGGCATGAGCCTGATCGCCCGCACCGCGGGCATTGGTCGCAGCGCGGAAGAATTGCAATGGGACTTGAATTACCTGCTCAAACTCTGGAGCGCCGTGCGCGACGCTTCGGAGACGCAAAAGGGCGCCTTCCTGATCTATCAGGAATCTTCGCTGGTCATCCGCGCCATCCGCGACTACTTCACCAGTGACATCGGCGAAATTCTGATCGACACCGAAGACGTGTTCGAGCAGGCACGGCAGTTCATGCTGCACGTCATGCCCGACACGGTCGAGCGCGTCAAACGCTACCGTGACGATCTGCCGCTGTTCTCGCGCTTTCAGATCGAGCAGCAGATCGAAACCGCCTATTCCCGCACGGTCAACCTGCCGGCCGGCGGCGCCATCGTCATCGACCACACCGAAGCGCTGGTGGCGGTGGACGTCAACTCCGCACGCTCCACGCGCGGCAACGCCATCGAAGACACCGCTCTGCGCACCAACCTCGAAGCCGCCGATGAAGTCGCTCGCCAGATGCGGCTGCGCGACCTTGGCGGCCTGATCGTGGTCGACTTCATCGACATGGAAGAGCCGCGCAACCAGCGCGCCGTCGAAGACCGCCTGCGCGACGCCATGCGCCAGGACCGTGCCCGCGTGCAGGTGAGCAAGATTTCCAAGTTCGGCCTGCTCGAACTCTCGCGCCAACGCCTGCGCCCCGCCCTGTCGGAAGGCGCTTACGTCACCTGCCCGCGCTGCAATGGCACCGGCCATATCCGCGACACCGAATCGAGCGCGCTGCAAATCCTGCGCATCATCCAGGAAGAGGCCATGAAAGAAGGCACGGCCGCCGTGCATGTGCAAGTGCCGGTGGAAGTCGCCTCTTTCCTGCTTAACGAAAAGCGCGCTGAGATCACCAAGATCGAACTCCGCCAGCGCCTGTCGGTGCTGCTGATCCCCAACAAGCACCTCGACACGCCCAACTACAAGCTCGAACGCCTCAAGCACGACGATCCGCGCCTGGACAATCTGCCCACCAGCTACAAAATGGCTGACGAGGCCGAAGAAGACACCGCCATCACCCGCCGCGAAAAAGAACAGCGCCCGCGTCAGGAAGCGCTGGTGCGCGGCATCACCCCGGAAGGCCCGGCCCCGGTCATGCCCGCCCCGGCTGCCGACAAGGCTCCCGCCCCCGCACCGACCCCGGCGGTTGCAACCCCCGCCGCCGCGCCTGCTGCTGCCGCAACGGCTGGCGGCGGTTTGTTTGGCTGGGTCAAGCGTCTGTTCTCCGCCGAACCACAACCCTCCGCTGCCGTGCAAGAGCCGCCGGTTGCCGCGCAGCCTGCCACCCCGGCCCTGACCAAGGCGGATGGGCAAGGCGGCCGCGGCGCACGCACGGCTTCTGGCCAAAACGGCAACCGCCGTCGCGGCGGCCGTGACCGCCAGCGCGAAGGCCAGGGCGAAAACCGTCAGCGCGGCAATCCGGCCGTTGGCGCGGAACCCGCCGAAGCCGCTGAAACCGCAGCAGGAGAAACCACCAACCCCCGCAACCGACCACCCCGTGGTCAACAGGGCCAGGCCGAACGCAGCGAGCGCCCCAAGCGCGAGCGCAACCCGGAAGAAGCCGCAGCTCGCAAGGAGCGCGCGCAAGCCGCACCTGAGCAAACCCGCGCACCCGCCGAAGAATCGGCTACGGACACGGCCGAACGTTCATCCGGAAGCGGGCGTGGCGGCAATCGCCGCCCGCGTCGTGAGCCCGTTGAAGCAGCGCCCGAAGCCGAACTGATCGATGCTCAGGCGCTTGAAACCCAAGCCGTGGACGATACCGAGGCCACCCCAGCCCTGACCGTCGGAGCGGGCGACGAAGCGCAGACCGAGCGCAAATCGCGCAATCGCCGCGGTCGTGGCCGCCGTGGTGGACGCCGCGAAGGCGCCGCCGCTGACGAGAACGGCAATCTGAGTGCCGAAGCGAACGAAGCCGTTGCCGAAGCCGATGCGGACGAGACAGCGGGTCGCAGCTTCGGCTCCCTGGCCGCGCCGCTGGCTTTGGGCGCCGTCGAAGCCCCCGCCGCGCCCGCGCTGGAAGATCAGACGCCGCTGATCCTCAGGATCGACGCCCCGGCCGACCTTGCCGTGGACGCTGCTCAGGCTGCCCCTCGGCCCGTTGCCCGGCCTTCCGAAGAAGCGCCGCTCGCCGCGCCCGACTCCCCGCCCGCCGTAGCAGAGTCGTCCTCCCTGATCGTCAAAGCGGTTGAAAACACCACGGCGGCAACCGCATCCGCAGCCGAGCCCGCTGCCGCTGTCGCCTATGTACTGCCGGTCGATGCTCTGCAGGCAACGGCGCAGGCCGCCGGGCTGCAATGGGTGCAGTCCAATGCCGACGCCATCCGCCGCGTGCAGGAAGAACTGGCCGCGCAACCCGCGCCCATTCATGTGCCGCGCGAACGCAAGCCCGCCCCCAAGCTCGACGATGGCCCGCTGATTCTGGTGGAAACCGCTCGCCCGCTGCCTACGCTGCAACTGCCGGAAAACAATCCGCCGGCGCATTGA
PROTEIN sequence
Length: 1002
MKRMLFNATQSEELRVAIVDGQKLLDIDIEQAGREQRKGNIYKAVVTRVEPSLEACFVDYGEERHGFLPFKEISRQYFKEGVSPSQARIQDVITEGQQLLVQVEKEERGNKGAALTTIISLAGRYLVLMPNNPRGGGVSRRIEGEDRQELRETMDQLQHPEGMSLIARTAGIGRSAEELQWDLNYLLKLWSAVRDASETQKGAFLIYQESSLVIRAIRDYFTSDIGEILIDTEDVFEQARQFMLHVMPDTVERVKRYRDDLPLFSRFQIEQQIETAYSRTVNLPAGGAIVIDHTEALVAVDVNSARSTRGNAIEDTALRTNLEAADEVARQMRLRDLGGLIVVDFIDMEEPRNQRAVEDRLRDAMRQDRARVQVSKISKFGLLELSRQRLRPALSEGAYVTCPRCNGTGHIRDTESSALQILRIIQEEAMKEGTAAVHVQVPVEVASFLLNEKRAEITKIELRQRLSVLLIPNKHLDTPNYKLERLKHDDPRLDNLPTSYKMADEAEEDTAITRREKEQRPRQEALVRGITPEGPAPVMPAPAADKAPAPAPTPAVATPAAAPAAAATAGGGLFGWVKRLFSAEPQPSAAVQEPPVAAQPATPALTKADGQGGRGARTASGQNGNRRRGGRDRQREGQGENRQRGNPAVGAEPAEAAETAAGETTNPRNRPPRGQQGQAERSERPKRERNPEEAAARKERAQAAPEQTRAPAEESATDTAERSSGSGRGGNRRPRREPVEAAPEAELIDAQALETQAVDDTEATPALTVGAGDEAQTERKSRNRRGRGRRGGRREGAAADENGNLSAEANEAVAEADADETAGRSFGSLAAPLALGAVEAPAAPALEDQTPLILRIDAPADLAVDAAQAAPRPVARPSEEAPLAAPDSPPAVAESSSLIVKAVENTTAATASAAEPAAAVAYVLPVDALQATAQAAGLQWVQSNADAIRRVQEELAAQPAPIHVPRERKPAPKLDDGPLILVETARPLPTLQLPENNPPAH*