ggKbase home page

SCN18_26_2_15_R5_F_scaffold_2594_1

Organism: SCN18_26_2_15_R5_F_SCN_Thiomonas_15x_64_14

near complete RP 37 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2..1216

Top 3 Functional Annotations

Value Algorithm Source
Putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUJ5_THIA3 similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 400.0
  • Bit_score: 810
  • Evalue 5.50e-232
Conjugal transfer protein TrbE {ECO:0000313|EMBL:CDW96359.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 404.0
  • Bit_score: 824
  • Evalue 3.90e-236
putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 400.0
  • Bit_score: 810
  • Evalue 1.50e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCN_Thiomonas_15x → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
GCCGTCTGGGCCGGGCCGGAGCACAACCCGTGTCCGTTCTACCCGCCAAACAGCCCGCCGCTGCTGCAGGCCAAGACCGACGGGGGCACGCCCTTCACCCTCAGCCTGCACGCGAGCGATCTTGGTCACAGTGCCATCCTCGGTCCGACCGGCGCTGGAAAGAGCACGCTGCTGGCCCTCGTGGCGGCGCAGCAATTTCGTTATCCGGGCGCACAGGTCTTCGTCTTCGACAAGGGGTATTCGATGCTGCCGCTGTGCTGGGCGGTCGGCGGCGAGCACTACGACATCGCGGGCGAGCAGGGTGATCTGGCCTTTTGTCCACTGGGCCGGGTCGATGAGCCTGCTGAGCGTGTGTGGGCCGCCGAATGGCTGGAACAACTGTGCGAGCTGCAGGGCGTCAAGATGTTGCCTCACCATCGCCAGGAGCTGTTCCGCGCGATCACCCAGCTCGGTGCCTCGACCGAGAAGATGGCGCAGCGCACCCTGACCAACTTCCTGGTGCTGCTGCAGGATCAGAGCCTGCGCGAAGCCCTGCAGGCCTACACCCTGCGCGGCATGGCCGGCCACCTGCTCGATGCCGAAACCGACAGCCTGGGGCAGGACGTGTTCCAGGTCTTCGAGATGGAGCACCTGATGAACAAGGGCGACAAGCTCGTTCTTCCGGTGCTGACCTATCTGTTTCACCGTATCGAGCAGCGTTTCAATGGGCAGCCCACTCTTTTGATCCTCGATGAAGCCTGGATCATGCTCAGCCATCCCGCGTTTAAGGCCAAGATCAGGGAATGGCTCAAAGTGCTGCGCAAGGCGAATGTGGCCGTGGTGTTCGCCACGCAGTCCCTGACCGACTTGGTGCGATCGGGCATCGCCGATGTGATCTTCGAGTCTTGCCCGACCAAAATTTTTCTGCCCAACCCCGAGGCCGAGACCGAGAACATCCGCCCCCTGTATGAGGGCGTGGGGCTCAACGCCCGGCAAATCCAGATTCTGGCCTTTGCCACCCCGAAGCGCCAGTACTACGTCATGCACCCAGACGGGTGCCGTCTGTTCGATCTTGGCCTGACCAGCCCCGAACTGGCCTTCGTCGGGGCCTGCGGCAAAAACGACATCGCTCGCATCCGGCAACTGCGCGAGACCCTTGGCGATGCGTGGCCCGCCCAATGGCTGCGCGAACGCGGCCAAAACCACGCCGCAGAACTTTGGGAGTCGTACGAATGA
PROTEIN sequence
Length: 405
AVWAGPEHNPCPFYPPNSPPLLQAKTDGGTPFTLSLHASDLGHSAILGPTGAGKSTLLALVAAQQFRYPGAQVFVFDKGYSMLPLCWAVGGEHYDIAGEQGDLAFCPLGRVDEPAERVWAAEWLEQLCELQGVKMLPHHRQELFRAITQLGASTEKMAQRTLTNFLVLLQDQSLREALQAYTLRGMAGHLLDAETDSLGQDVFQVFEMEHLMNKGDKLVLPVLTYLFHRIEQRFNGQPTLLILDEAWIMLSHPAFKAKIREWLKVLRKANVAVVFATQSLTDLVRSGIADVIFESCPTKIFLPNPEAETENIRPLYEGVGLNARQIQILAFATPKRQYYVMHPDGCRLFDLGLTSPELAFVGACGKNDIARIRQLRETLGDAWPAQWLRERGQNHAAELWESYE*