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SCN18_14_9_16_R5_B_scaffold_21

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Displaying items 301-330 of 366 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R5_B_scaffold_21_298
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(310837..311004)
DNA (168bp) protein (56aa)
SCN18_14_9_16_R5_B_scaffold_21_299
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(311196..312152)
DNA (957bp) protein (319aa)
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCV0_9RHIZ
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:CDX12459.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
lipid A biosynthesis lauroyl acyltransferase
SCN18_14_9_16_R5_B_scaffold_21_300
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(312152..313180)
DNA (1029bp) protein (343aa)
PREDICTED: synaptic vesicle membrane protein VAT-1 homolog n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17885
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:EXL09845.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
alcohol dehydrogenase zinc-binding domain-containing protein
SCN18_14_9_16_R5_B_scaffold_21_301
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(313360..314631)
DNA (1272bp) protein (424aa)
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:EZQ16695.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EZQ16695.1};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
3-oxoacyl-ACP synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C2435
3-oxoacyl-(acyl-carrier-protein) synthase
SCN18_14_9_16_R5_B_scaffold_21_302
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(314703..315890)
DNA (1188bp) protein (396aa)
PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14BE4
Beta-ketoacyl synthase {ECO:0000313|EMBL:CDX40329.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
beta-ketoacyl synthase
SCN18_14_9_16_R5_B_scaffold_21_303
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(315957..316241)
DNA (285bp) protein (95aa)
Acyl carrier protein n=2 Tax=Mesorhizobium RepID=M5ERM2_9RHIZ
Acyl carrier protein {ECO:0000313|EMBL:CDX44513.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphopantetheine-binding protein
SCN18_14_9_16_R5_B_scaffold_21_304
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316419..317012)
DNA (594bp) protein (198aa)
UPI0003D0667D related cluster n=1 Tax=unknown RepID=UPI0003D0667D
Putative phosphohistidine phosphatase SixA {ECO:0000313|EMBL:CDX44524.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphoglycerate mutase
SCN18_14_9_16_R5_B_scaffold_21_305
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

317151..318101
DNA (951bp) protein (317aa)
PREDICTED: putative auxin efflux carrier component 5-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18272
Transporter {ECO:0000313|EMBL:ESW86128.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
auxin efflux carrier
SCN18_14_9_16_R5_B_scaffold_21_306
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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318275..319732
DNA (1458bp) protein (486aa)
Succinate-semialdehyde dehdyrogenase {ECO:0000313|EMBL:ESW86127.1}; EC=1.2.1.16 {ECO:0000313|EMBL:ESW86127.1};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12DFB
succinate-semialdehyde dehydrogenase
SCN18_14_9_16_R5_B_scaffold_21_307
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319782..320798
DNA (1017bp) protein (339aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
aldose 1-epimerase (EC:5.1.3.3)
PREDICTED: aldose 1-epimerase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18F1E
SCN18_14_9_16_R5_B_scaffold_21_308
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(320835..321755)
DNA (921bp) protein (307aa)
PREDICTED: probable fructokinase-4-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14527
sugar kinase, ribokinase
Sugar kinase, ribokinase {ECO:0000313|EMBL:AGB46057.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_14_9_16_R5_B_scaffold_21_309
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

321908..322357
DNA (450bp) protein (150aa)
UPI0003CEB63A related cluster n=1 Tax=unknown RepID=UPI0003CEB63A
Auxin-binding protein {ECO:0000313|EMBL:ESY74740.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
auxin-binding protein
SCN18_14_9_16_R5_B_scaffold_21_310
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322365..323579
DNA (1215bp) protein (405aa)
UPI0003CFC959 related cluster n=1 Tax=unknown RepID=UPI0003CFC959
Methylamine utilization protein {ECO:0000313|EMBL:ESZ01422.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
Di-heme cytochrome c peroxidase
SCN18_14_9_16_R5_B_scaffold_21_311
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(323582..324031)
DNA (450bp) protein (150aa)
UPI0003CE13C9 related cluster n=1 Tax=unknown RepID=UPI0003CE13C9
DNA-binding transcriptional dual regulator, leucine-binding {ECO:0000313|EMBL:CDX44546.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
transcriptional regulator
SCN18_14_9_16_R5_B_scaffold_21_312
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

324199..327819
DNA (3621bp) protein (1207aa)
Fused DNA-binding transcriptional regulator proline dehydrogenase pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:CCV14443.1}; EC=1.5.1.12 {ECO:0000313|EMBL:CCV14443.1};; EC=1.5.99.8 {ECO:0000313|EMBL:CCV14443.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Fused DNA-binding transcriptional regulator proline dehydrogenase pyrroline-5-carboxylate dehydrogenase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FE67_9RHIZ
SCN18_14_9_16_R5_B_scaffold_21_313
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

327950..328306
DNA (357bp) protein (119aa)
UPI0003CE4607 related cluster n=1 Tax=unknown RepID=UPI0003CE4607
Uncharacterized protein {ECO:0000313|EMBL:ESW83135.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_14_9_16_R5_B_scaffold_21_314
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(328418..328732)
DNA (315bp) protein (105aa)
UPI0003D04977 related cluster n=1 Tax=unknown RepID=UPI0003D04977
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ESZ04911.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
antibiotic biosynthesis monooxygenase
SCN18_14_9_16_R5_B_scaffold_21_315
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(328776..329987)
DNA (1212bp) protein (404aa)
TonB family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCW8_9RHIZ
TonB family protein {ECO:0000313|EMBL:EHH10440.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
TonB family protein
SCN18_14_9_16_R5_B_scaffold_21_316
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330016..330450)
DNA (435bp) protein (145aa)
UPI0003CFB7BA related cluster n=1 Tax=unknown RepID=UPI0003CFB7BA
Uncharacterized protein {ECO:0000313|EMBL:ESZ04913.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCN18_14_9_16_R5_B_scaffold_21_317
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330460..332673)
DNA (2214bp) protein (738aa)
TonB-dependent heme/hemoglobin receptor family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCX0_9RHIZ
TonB-dependent heme/hemoglobin receptor family protein {ECO:0000313|EMBL:CDX29280.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
heme acquisition protein hasR
SCN18_14_9_16_R5_B_scaffold_21_318
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332871..333080
DNA (210bp) protein (70aa)
Hemin uptake protein hemP n=5 Tax=Mesorhizobium RepID=V7EYJ9_9RHIZ
Hemin uptake protein hemP {ECO:0000313|EMBL:CDX40273.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hemin uptake protein HemP
SCN18_14_9_16_R5_B_scaffold_21_319
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

333102..334160
DNA (1059bp) protein (353aa)
Hemin transport protein hmuS n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETX5_9RHIZ
Hemin transport protein hmuS {ECO:0000313|EMBL:CCV07475.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
putative heme degradation protein
SCN18_14_9_16_R5_B_scaffold_21_320
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334157..335053
DNA (897bp) protein (299aa)
Periplasmic binding protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLG5_9RHIZ
Periplasmic binding protein {ECO:0000313|EMBL:CCV14434.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
periplasmic binding protein
SCN18_14_9_16_R5_B_scaffold_21_321
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

335067..336158
DNA (1092bp) protein (364aa)
Vitamin B12 transporter subunit: membrane component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU91_9RHIZ
Vitamin B12 transporter subunit: membrane component of ABC superfamily {ECO:0000313|EMBL:CCV07473.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transport system permease
SCN18_14_9_16_R5_B_scaffold_21_322
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

336168..336974
DNA (807bp) protein (269aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
PREDICTED: sulfate/thiosulfate import ATP-binding protein cysA-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10C9D
ABC-type hemin transport system, ATPase component
SCN18_14_9_16_R5_B_scaffold_21_323
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336977..337441)
DNA (465bp) protein (155aa)
UPI0003CFCA42 related cluster n=1 Tax=unknown RepID=UPI0003CFCA42
Transcriptional regulator {ECO:0000313|EMBL:ESZ25143.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
BadM/Rrf2 family transcriptional regulator
SCN18_14_9_16_R5_B_scaffold_21_324
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

337688..340903
DNA (3216bp) protein (1072aa)
PREDICTED: bifunctional P-450:NADPH-P450 reductase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16548
Putative bifunctional P-450/NADPH-P450 reductase 2 {ECO:0000313|EMBL:CEJ14544.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
bifunctional P-450:NADPH-P450 reductase
SCN18_14_9_16_R5_B_scaffold_21_325
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

340948..341655
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00036CB840
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJE51743.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
extracellular solute-binding protein
SCN18_14_9_16_R5_B_scaffold_21_326
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

341777..342337
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E4782C
GCN5 family acetyltransferase {ECO:0000313|EMBL:EXL09827.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
N-acetyltransferase GCN5
SCN18_14_9_16_R5_B_scaffold_21_327
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(342443..343636)
DNA (1194bp) protein (398aa)
UPI0003CE8F73 related cluster n=1 Tax=unknown RepID=UPI0003CE8F73
Uncharacterized protein {ECO:0000313|EMBL:ESY92240.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
Displaying items 301-330 of 366 in total

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