ggKbase home page

SCN18_14_9_16_R4_B_scaffold_553_10

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 7223..7807

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WY81_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 193.0
  • Bit_score: 313
  • Evalue 1.30e-82
DNA, contig: SP655 {ECO:0000313|EMBL:GAN15329.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 193.0
  • Bit_score: 313
  • Evalue 1.80e-82
30S ribosomal protein S30 similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 195.0
  • Bit_score: 307
  • Evalue 2.70e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGATATCCGCGTTTCTGGTCATCAGGTCGCTACGGGCGCTGCGCTCAAGGGGCATGTCGATGAACGGCTTCAGGGTATCGCGGACAAATATTTCTCGCGCGCGATCTCGGCTGAAGTGACCTTCGGCCAGGGGCCGCATGACGCAGGATTCAGATGCGATATCGTCGCCCATGTGATGAAGGCGCTGGTGCTCAAGGGCCAAAACACCGCGCAGGACGCGCATCTCGCCTTCGATGGCGCGGCGGCCCGGATCGAAACCCAGCTGCGACGCTATATGCGACGATTGAAGGATCGCCAGGCGGACAAGGCGCTCGAGCTGGCGCAGGCCAATGGCTATGACAATGCCGGCTATACGTTATTCGCCGAGGTGATCGACGAGGACGAAGCGGGCGATGCCCCGCTGATCGTCGCCGAGACCCGCGTCGACGTGCCCGACGCCAGCGTTTCCGATGCCGTGATGATGCTCGACCTGCGCAACACCCAGGCGCTGCTGTTCCGAAATTCGGGCACCGGCGCCTATAATATGGTCTATCGTCGCGGCGACGGGACGATCGGCTGGGTCGAGCCACAGCGCGCGCGCTGA
PROTEIN sequence
Length: 195
MDIRVSGHQVATGAALKGHVDERLQGIADKYFSRAISAEVTFGQGPHDAGFRCDIVAHVMKALVLKGQNTAQDAHLAFDGAAARIETQLRRYMRRLKDRQADKALELAQANGYDNAGYTLFAEVIDEDEAGDAPLIVAETRVDVPDASVSDAVMMLDLRNTQALLFRNSGTGAYNMVYRRGDGTIGWVEPQRAR*