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SCN18_14_9_16_R4_B_scaffold_1650_7

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(5801..7204)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 462.0
  • Bit_score: 668
  • Evalue 4.20e-189
leuC1; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 461.0
  • Bit_score: 649
  • Evalue 5.30e-184
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 462.0
  • Bit_score: 668
  • Evalue 3.00e-189

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
GTGACCGACACCCTGTTCGATCACATCTGGGATCGCCACGCCATCCTCCAGGATGGCGGCGAGACATTGCTCTACGTCGACCTGCATCTGTTGCACGAAGTCACCTCGCCACAGGCTTTTGCCGGGCTTGAAGCGCATGGGCGCGGGGTCCGCCAGCCGGGGCGGACGCTGGCGCTGTTCGATCACAATGTCCCCACCGTCGCGCAGGCCGACGGCATCGCAGCGGTCGCCGACCCTGAGGCGCGCGCGCAGCTCGCCCGGCTGGTCGAGAATAGCGAGCGCTACAAGATCGAGCGGTTCGACATGGGCGATCCGCGCAACGGCATCGTCCATGTCGTCGCCCCCGAACAGGGGCGCACCTGGCCGGGGATGACGATCGTGTGCGGCGACAGCCACACCTCGACCCATGGCGCATTCGGCTCGCTGGCGTTCGGCATCGGCACCTCGCAGATCGAACATGTCCTCGCGACGCAGACATTGCGGCTGCGCAAACCCAAGTCGATGCGGCTCAATGTCACCGGCGCGCTACCAGCGCATCTCTCGGCCAAGGATCTCGCGCTCGGCATCCTCGCCGCGATCGGGGTCGATGGCGCCTTGGGGCATGTCATGGAATTCGCCGGCACGGCGGTCGCTGCGCTGTCGATGGAAGCGCGGATGACATTGTGCAACCTCGCGGTCGAGATGGGCGCACGCGCCGCGTTGATCGGCCCTGACGAGACGACCTTCGCCTATCTAGCCGGGCGGCCGGGCGCGCCGCAGGGCGAGGAATGGGACCGCCACGTCGCCGAATGGCGCACGCTTGCCAGTGCCCCCGACGCGCATTTCGATCGCGAGATTTCGGTCGCGGCGGATACGCTGCGTCCGATGGTGACCTGGGGCACCGTGCCGTCGCAGGTCATTGCGATCGACGGCCATATCCCCGATCCGCGCACCACCGCCGATCCGCTCGACCGCGCCGCGCAGGAACGCGCGCTCGCTTATATGGGGCTCGCGCCCGATCAGCCGATCGCCGGGCTGGCGATCGACCGCGCCTTTATCGGCAGCTGCACCAACAGCCGGATCGAGGATCTGCGGACGGTCGCCGCGATCGCGCGCGGGCGGCATGTCGCGCCGGGCGTGAAGGCGATGATCGTTCCCGGTTCGGGGCTGGTCCGCCAGCAGGCCGAAGCGGAGGGGCTGGCCGATATCTTCCGCGCGGCGGGGTTCGACTGGCGCGAGCCTGGTTGCTCGATGTGCGTGGGCATGAACCCCGATCGGCTCGCCCCCGGCGAACGCTGCGCGGCGACCTCCAACCGCAATTTCGAGAACCGTCAGGGCGCCGGTGGCCGGACGCATCTGATGAGCCCCGCAATGGCCGCTGCGGCGGCGATCGCCGGGCGGATTATCGATCCGGCGGATATTTGA
PROTEIN sequence
Length: 468
VTDTLFDHIWDRHAILQDGGETLLYVDLHLLHEVTSPQAFAGLEAHGRGVRQPGRTLALFDHNVPTVAQADGIAAVADPEARAQLARLVENSERYKIERFDMGDPRNGIVHVVAPEQGRTWPGMTIVCGDSHTSTHGAFGSLAFGIGTSQIEHVLATQTLRLRKPKSMRLNVTGALPAHLSAKDLALGILAAIGVDGALGHVMEFAGTAVAALSMEARMTLCNLAVEMGARAALIGPDETTFAYLAGRPGAPQGEEWDRHVAEWRTLASAPDAHFDREISVAADTLRPMVTWGTVPSQVIAIDGHIPDPRTTADPLDRAAQERALAYMGLAPDQPIAGLAIDRAFIGSCTNSRIEDLRTVAAIARGRHVAPGVKAMIVPGSGLVRQQAEAEGLADIFRAAGFDWREPGCSMCVGMNPDRLAPGERCAATSNRNFENRQGAGGRTHLMSPAMAAAAAIAGRIIDPADI*