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SCN18_14_9_16_R4_B_scaffold_1514_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 698..3304

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7I0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 859.0
  • Bit_score: 1179
  • Evalue 0.0
Hopanoid-associated RND transporter, hpnN {ECO:0000313|EMBL:GAO55501.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 845.0
  • Bit_score: 1221
  • Evalue 0.0
hopanoid biosynthesis associated RND transporter-like protein HpnN similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 860.0
  • Bit_score: 996
  • Evalue 2.50e-288

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2607
ATGCAGCGTTCCCCGGTTGCCGGCCTCGTTGCCGCGAGCGTGCGGCGTCCGTGGCTGACGATCGTCGGCGCGGTGATCCTGGCGGCGCTGGCGCTGGTGGTGGTGGTCGAGCGGTTCGCGATGACCACCGATACCGCCGCGCTGATCTCCCCCGATGTCGACTGGCGGCGGCAGGAACGCGCGATGGAGGCCGCCTTCCCGCAGCTGACCGACGCGATGCTGATCATGGTCGACGGCGCCACCCCCGAGCTGGCCGAGGACGGCGCGGCACGGCTTGAAGCGCGGCTGGGCGAAGACAAAGCGCATTTCCGCCGCGTCACCCGCCCCGACGGCGGCGACTATTTCGCGCGTCAGGGGCTGTTGTTCGGCAGCGAAAAGGAGGTGCGCGACGCCACCGCGGCGTTGGTCGAGGCGCAGCCGATGCTCGGCCCGCTCGCCGCCGACCCCAGCCTGCGCGGCGTCGCGGGCGCGCTGTCGACGATGGCCGACGGCGTCGCGGCGGGGCAGGTATCGCTCGATCGCATCGACAAGCCGATCCGCGCGCTGGCCGACGCGACCGACGGCGTATTGCAGGGCCATCCCGCGCCCTTTTCGTGGCAGCGGCTGTTCGCCAGCAGCGGCGGCGCGCTCGCCCCGCCGACCCGCCGGCTGGTGCTGGTCCAGCCGGTCCTCGATCACAGCGATTTGATGCCCGGCGAGGCGGCGACCGACGCGGTGCATGCCGCAGCCGGCGCATTGGGGCTCGACGCGGCGCATGGCGTCCGGGTCCAGCTGACCGGCGAGGTGCCGCTGGCGGACGAGGAATTCGCCAGCCTGCGCGAGAATATCGGGCTGGTCGGCGCGGTGATGCTGGCGGCGATGCTGATCACCTTGTGGTTCGCGACGCGATCGGTGCGGCTGGTCGCGGCGATCCTCGGGACGATCGTGCTCGGGCTGATCCTGACCATGGCGGCGGGGCTGCTCGCGGTCGGGCGGTTCAATGTGATCTCGGTCGCCTTCATTCCCTTGTTCGTCGGGCTGGGGGTCGATTTCGGCATCCAGTTATGCGTTCGCTACAATGCCGAGCGGGTCGAGGGTGCGGCGCCCGACGCGGCGATGCAGCAGGCCGCGGTGGCGCTCGGCGCGCCGCTGACGCTCGCCGCCGGCGCGATCTTCCTCGGCTTCGGCGCCTTCCTGCCGACCGATTATATCGGCATCGCCGAACTGGGGCTGATCGCCGGGATCGGCATGGTGATCGCGCTCGCACTGAGCGCGACCCTGCTCCCCGCCTTGGTGATCGTGTTCCGCCCGGATCGCCCGCGCGGCGAGGTCGGCTTCGCCGCGCTCGCGCCGATCGACCGGCTGCTCGAGCGTCGCCGCGGCGCGGTGCTCTGGGCGTTCGTCGTCGCATTGATCGTCAGCATCGCATTGCTGCCGTGGGCGTCGTTCGACTTCAACCCGCTCCACCTGCGCGATCCGGCCGCGCCGTCGATGCGCGCGCTGGCCGATCTGACCCGCGATCCCGATCGCACCCCGAACACGATCGACGTCCTCGCCCGCAACACCAGTGAAGCGCAGGCGCTGACCCGCAAGCTCGCCGCTTTGCCGGAAGTTTCGCATGTCGTGTCGCTCGACAGTTTCGTGCCCGAGGATCAGCCGGCCAAGCTCGCGCTGATCCAGGACGCCGCATTGTTGCTCGACGTGACGATCAACCCGCTCGACACCGCCGCGCCGCCGAGCGACGCCGAGATGGTCGCCGCGCTCACGCAAAGCGCGACCCGGCTGCGCGAGGTCTCCGCCAACAACCAGACGCCCGGCGCACGCGATGCCCAGCGGCTGGCGGCGCTGTTCGATCAGCTGGCGCAGGCCGCGCCCGCCAAGCGCGCGGCGCTCAACGCGACGCTCGCCAAACCGCTCGGGGTGATGCTCGATCAGGTGCGCACCGCCTTGCAGGCCGCGCCGATGACGCGTGCCGATCTGCCGCCCGATCTGGTGCGCGGCTGGGCGGCGCCCGACGGGCGGGTGCGGCTACAGGTCTTCCCCAGCGGCAACAGCAACGACAATCAGGTGATCAGCCGCTTCCGCGACGCGGTGGCCGGGGTGACGCCCTCGATCTCGGGCCTGCCGGTGGGCACGCAGGCGGCGGCGGGGACGATCGCCGGCGCCTTCGTCCGCGCCGGGGTGCTCGCGTTCCTCTTGGTCAGCGCCTTGTTGTTCGCGGTGCTGCGTGACGTGCGTGAGGTGGCGTTCACGCTTGCGCCGGTGGTGCTGTCGATCTTCCTGACGTTGGGGAGCTGCGTGCTGATCGGCCAGCCGATCAATTTCGCCAATATCATCGCCTTCCCGTTGCTGTTCGGGGTCGGCGTCGCCTTCCACATCTATTTCGTGATGGCGTGGCGCGCGGGGGCGACCGGGCTGCTGCAATCGAGCCTCGCGCGCGCCGTGCTGTTCAGCGCGCTCGCCACCGGCACCGCCTTCGGCAGCCTGTGGCTGTCGCATCATCCGGGGACCGCCAGCATGGGCGAAATCCTCATGATCTCGCTGATCTGGACCCTGATCTGCGCGCTGATCTTCGAGCCCGCGCTGCTCGGGCCGCCTAACCCCGTGCGAGCTGACGCGCCTCGCTGA
PROTEIN sequence
Length: 869
MQRSPVAGLVAASVRRPWLTIVGAVILAALALVVVVERFAMTTDTAALISPDVDWRRQERAMEAAFPQLTDAMLIMVDGATPELAEDGAARLEARLGEDKAHFRRVTRPDGGDYFARQGLLFGSEKEVRDATAALVEAQPMLGPLAADPSLRGVAGALSTMADGVAAGQVSLDRIDKPIRALADATDGVLQGHPAPFSWQRLFASSGGALAPPTRRLVLVQPVLDHSDLMPGEAATDAVHAAAGALGLDAAHGVRVQLTGEVPLADEEFASLRENIGLVGAVMLAAMLITLWFATRSVRLVAAILGTIVLGLILTMAAGLLAVGRFNVISVAFIPLFVGLGVDFGIQLCVRYNAERVEGAAPDAAMQQAAVALGAPLTLAAGAIFLGFGAFLPTDYIGIAELGLIAGIGMVIALALSATLLPALVIVFRPDRPRGEVGFAALAPIDRLLERRRGAVLWAFVVALIVSIALLPWASFDFNPLHLRDPAAPSMRALADLTRDPDRTPNTIDVLARNTSEAQALTRKLAALPEVSHVVSLDSFVPEDQPAKLALIQDAALLLDVTINPLDTAAPPSDAEMVAALTQSATRLREVSANNQTPGARDAQRLAALFDQLAQAAPAKRAALNATLAKPLGVMLDQVRTALQAAPMTRADLPPDLVRGWAAPDGRVRLQVFPSGNSNDNQVISRFRDAVAGVTPSISGLPVGTQAAAGTIAGAFVRAGVLAFLLVSALLFAVLRDVREVAFTLAPVVLSIFLTLGSCVLIGQPINFANIIAFPLLFGVGVAFHIYFVMAWRAGATGLLQSSLARAVLFSALATGTAFGSLWLSHHPGTASMGEILMISLIWTLICALIFEPALLGPPNPVRADAPR*