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SCN18_14_9_16_R4_B_scaffold_2738_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2229..3491)

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-selective porin OprB n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A8F similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 377.0
  • Bit_score: 236
  • Evalue 4.40e-59
carbohydrate-selective porin oprb similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 364.0
  • Bit_score: 219
  • Evalue 9.30e-55
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ADU12564.1}; Flags: Precursor;; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 364.0
  • Bit_score: 219
  • Evalue 4.60e-54

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Taxonomy

CN-SCN_Sphingomonas_18x → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGGTAGCGAAGAATTCTGCGTGGATTTCGGCCTGTGTCATCAGCCTCGCGCTGGCACCTCCCGCGTTCGGGCAGGCGCAGCCGGTGGCCGATCCGACAAAGACCGCCAATCAACCCGCCGGACCACCGCAGGACAAGCCGCCGGCACCAGCACCGTCGCCCTTCACCTTTACCGTCAATTACGATCTCGACCTGCTCGATAATCTGAGCGGAGGGCGGTCACGGGGGACAGGCCACGCCGATCTCCTGAAAGCATCAATTGGCTATGACGGAAACCTCCAGGGGCGCGAGGGGCTAAGCGCACTCGTCAGCCTCGAACATGGCTTCGGTTCGGATTTCACTCCCCAGCGTATCGGCGGGTTCCAGGCCGTCACCTCGATCGAAGCGCACCCTGCGGCAACACGGCTCTATGAAGCCTGGGTGCAGCAGGACGTGCTCGAAGGGCGTGCCGGAGTCAAAGTTGGCCTGATCGATCTGAACACGATCTTCGACGTGCAGGAGACGGCGGCGCTGTTTCTGAATGCAGCGGATGGAACGGGGACCGATCTTGCCGATACCGGGGTCAATGGTCCGTCAATCTACCCGACCACCGCCGCCGCGATTGCCGGTTTCTGGCGTCCGGATAACGACTGGACGCTCCAACTCGGCGTCTTCGACGCGACGGCGGGCGACCCCCGTCATCGATCGGACTTTCTTGCGGTGAGGCTCCGCGGCGCCTTGATCATTGCGCAGGTCGAGCGCCGCTTCGGCGACACGGCGCGGATCGAGGTCGGAGCCTGGGACTATACCAACAGCTTCCCCGCACTTGACCGGTTCGGTCTGGACGGTACGCCGCAGCGGCTGCACGGCAATGCCGGTGTCTATGGCCTGATTGAGGGACGGCTCCTCGATCGCGGCGGAGATGGAAAGGGGCTGAGCGGATGGCTTCGGATCGGTTTTGCCAATGGCGACATCAATCCCGCGCAACGCTATCTTGGCACGGGGCTGGTCTATACCGGTCCAATCCATGGCCGCGACAAGGACGAGGCCGGCATCGCGGTCGCCGACGTCGAATTTGGTGAAGGCGCGCGTGTCGCCGCGCTGCAGGAAGAACGCACCCTGAGCGGACATGAAACCGTGGTCGAAGCCACCTATCGCTATGCCTGGAAGGACTGGATCGCCGTCCAGCCCGATGTGCAATATATCATCCGGCCGCATGGTGACCGGCATATCGACAATGCGTTGATGATCGGCGTTCGGCTGGCTTTTACCTGGTCGAAGTAA
PROTEIN sequence
Length: 421
MVAKNSAWISACVISLALAPPAFGQAQPVADPTKTANQPAGPPQDKPPAPAPSPFTFTVNYDLDLLDNLSGGRSRGTGHADLLKASIGYDGNLQGREGLSALVSLEHGFGSDFTPQRIGGFQAVTSIEAHPAATRLYEAWVQQDVLEGRAGVKVGLIDLNTIFDVQETAALFLNAADGTGTDLADTGVNGPSIYPTTAAAIAGFWRPDNDWTLQLGVFDATAGDPRHRSDFLAVRLRGALIIAQVERRFGDTARIEVGAWDYTNSFPALDRFGLDGTPQRLHGNAGVYGLIEGRLLDRGGDGKGLSGWLRIGFANGDINPAQRYLGTGLVYTGPIHGRDKDEAGIAVADVEFGEGARVAALQEERTLSGHETVVEATYRYAWKDWIAVQPDVQYIIRPHGDRHIDNALMIGVRLAFTWSK*