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SCN18_14_9_16_R4_B_scaffold_1300_11

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 13123..13341

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4Z7_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 69.0
  • Bit_score: 84
  • Evalue 2.90e-14
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 69.0
  • Bit_score: 84
  • Evalue 8.10e-15
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABQ67363.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 69.0
  • Bit_score: 84
  • Evalue 4.00e-14

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Taxonomy

Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGAGCGCGATGCTGGCGGGCAAGGTCGCGCTGGTCACCGGCGCGAGCGCAGGGCTGGGGCGCGGCTTCGCACAGACGCTGGCGGGGGCCGGCGCCGCGGTCGTGGTGTGCGCCCGGCGCGGGGCGGCGCTGACCACGCTGGTGGCGGACATCGCGGCCGCGGGCGGCCGCGCGCTGGCGCATCCGATCGACGTCACCGATGCCGCGGCGATCCCGGCG
PROTEIN sequence
Length: 73
MSAMLAGKVALVTGASAGLGRGFAQTLAGAGAAVVVCARRGAALTTLVADIAAAGGRALAHPIDVTDAAAIPA