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SCN18_14_9_16_R4_B_scaffold_1325_12

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(14214..15122)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039A2679 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 298.0
  • Bit_score: 455
  • Evalue 3.30e-125
Transcriptional regulator {ECO:0000313|EMBL:EKG37742.1}; TaxID=1154762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. avellanae str. ISPaVe037.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 298.0
  • Bit_score: 447
  • Evalue 9.70e-123
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 298.0
  • Bit_score: 442
  • Evalue 6.30e-122

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGACCGCGGAACTTCAGGATCTTTCGGCCTTCATGATCGTGGTGCGCGCCGGCGGGTTTCGCGAGGGCGCCAAGATCGGCGGCGGCTCGGCCTCGGGATTGAGCGAGGCGGTCCGCCGGCTGGAGGCGCGGCAGGGCGTCCGGCTGCTCAACCGCACGACGCGCAGCGTGACCCCGACCGAGGCCGGCCAGCGGCTGATGGAACGATTGGTCCCGGCGCTGGGCGCGGTCGAGGAAGCGCTCGATATCCTCAACAATTTCCGCGACCGCCCGGCAGGGACGCTGCGGATCAACGTACCCTCGGTCGCAGCGAGGGTCGTGCTGCCGCGGATCGTGCCCGATTTCCTCCGCGCCTATCCCGACATCAAGCTCGAGGTGATCGTCGAGGACCGTTATGTCGATGTGCTCGCCGAAGGCTGCGACGCGGGCATCCGCTACGACGAGCGGCTCGAACAGGATATGATCGCGATCCCGATCGGCCCGCGCATCCAGCGTTTCGCCACCGCCGCGGCGCCGGCCTATCTCGCGGCGCATGGCACGCCGGCGCATCCGCGCGACCTGCTCGATCACCGCTGCCTGCGCGGGCAATTCGCCAGCGGCTTCATCCCGCCGTGGGAATTCGCGTGCGGCGACGAACTGGTGCGGATCGATCCCACCGGCCCGTTGCTCGTGCGGCTCGGCGGCGCGGTCGATCTTGCGGTGAGCGCGGCGGTCGACGGCCTCGGCATCGTCCATCTGTTCGAGGAATGGCTGCAGCCGCATATCGCGGCGGGCCGGCTCGTCCCGATCCTCGAACACTGGTGGGAAAGCTTCCCGGGGCCGTTCCTATATTATCCCGGGCGGCGCTATGTCCCCGCGCCGCTCCGGGCCTTCATCGACTTCATCAGGGCGCATCCCACGCCGGCCTGA
PROTEIN sequence
Length: 303
MTAELQDLSAFMIVVRAGGFREGAKIGGGSASGLSEAVRRLEARQGVRLLNRTTRSVTPTEAGQRLMERLVPALGAVEEALDILNNFRDRPAGTLRINVPSVAARVVLPRIVPDFLRAYPDIKLEVIVEDRYVDVLAEGCDAGIRYDERLEQDMIAIPIGPRIQRFATAAAPAYLAAHGTPAHPRDLLDHRCLRGQFASGFIPPWEFACGDELVRIDPTGPLLVRLGGAVDLAVSAAVDGLGIVHLFEEWLQPHIAAGRLVPILEHWWESFPGPFLYYPGRRYVPAPLRAFIDFIRAHPTPA*