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SCN18_14_9_16_R4_B_scaffold_3185_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 4886..5698

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein n=1 Tax=Sphingomonas melonis RepID=UPI00035FA602 similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 262.0
  • Bit_score: 399
  • Evalue 2.50e-108
pilus assembly protein TadC similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 266.0
  • Bit_score: 411
  • Evalue 1.40e-112
Pilus assembly protein TadC {ECO:0000313|EMBL:AJP70924.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 266.0
  • Bit_score: 411
  • Evalue 6.90e-112

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGGAAACGGTCCACAATCCGACCCTGCTTGGCATCGACGTCTACATGGTGGCGACGATCGTGTCGGGCCTCATCGCGCTCCTGGTGTTGGTGGCGATCTATGCCGCGCTCACCGTCCGCGATCCGATGGCCAAGCGGGTCAAGGCGCTCAACGAGCGGCGCGAACAGCTGAAGGCGGGCATCACCGCCCCCAGCGGCAAGCGCCGCGCCAAATTGGTGCGCCAGAGTGAGGGCGCGGATCGCATGCGCGCGTTCCTCTCCTCGCTCAAGGTGTTGCAGGATAGCCAGGTCAAGGAAGCGCAGCTCAAGCTGCTCCAGGCCGGCATCCGATCGAAGGAATGGGCGGTCGGCGTGATCTTCGGCCGGCTGATGCTGCCGATCTTGCTTGGCGGCATCATGGTGTTCCTGGTTTATGGCACCGAAAGCTTTGCCGACTGGACCCCGCTCAAACGCTACGGGCTCGTCGCGATCACCTTCATCATCAGCTATAAAGCGCCCGATATCTTCCTGAAAAACAAGATTACCAAGCGCTCGCACGCGATCCGCAAGGGCATTCCGGACGCGCTCGACCTGCTGGTGATCTGCGCCGAGGCCGGGTTGACGGTCGATGCCGCCTTCCATCGCGTCGCAAAGGAACTCGGCAAGGCCTATCCCGAACTGGGCGACGAATTCGCGCTGACCGCGATCGAGCTGGGCTTCCTGACCGACCGGCGACAGGCGTTCGAGAATCTATCGAGCCGCGTCGCGCTCGACGACGTAAAGGGCATCGTCACCTCGATGATCCAGACCGAGAAATACGGCACCCCGCTCGCC
PROTEIN sequence
Length: 271
METVHNPTLLGIDVYMVATIVSGLIALLVLVAIYAALTVRDPMAKRVKALNERREQLKAGITAPSGKRRAKLVRQSEGADRMRAFLSSLKVLQDSQVKEAQLKLLQAGIRSKEWAVGVIFGRLMLPILLGGIMVFLVYGTESFADWTPLKRYGLVAITFIISYKAPDIFLKNKITKRSHAIRKGIPDALDLLVICAEAGLTVDAAFHRVAKELGKAYPELGDEFALTAIELGFLTDRRQAFENLSSRVALDDVKGIVTSMIQTEKYGTPLA