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SCN18_14_9_16_R4_B_scaffold_3219_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2..658

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal cation tricomponent efflux outer membrane porin ZneC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN93_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 213.0
  • Bit_score: 224
  • Evalue 6.90e-56
RND efflux system, outer membrane lipoprotein, NodT family similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 214.0
  • Bit_score: 224
  • Evalue 2.00e-56
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 215.0
  • Bit_score: 226
  • Evalue 2.50e-56

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Taxonomy

SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
TCCGTGGGACTTGGTATTAGTCTGCCGCGCGAGCTGCCGATGAGCCTGCCGTCGCAGCTGGTGAACCAGCGGCCCGATATTCGCTCGGCCGAGGCCAATCTTCACGCGGCAAGCGCCGCGGTTGGCGTCGCGATCGCCAATCGTCTGCCGCAACTCACGCTCAGCGCCGCTGCCGGCGGCCAGTCGAACCTCTGGTCGACGATCCTGTCGGCCGCCAATCACTTCTGGTCGATCGGCGCCGGCATCGCCCAGCCGATCTTCCAGGGCGGCGCGCTCCTGCACAAGCAACGCGCGGCGGAGGCCGGGTACAAGCAGGCCGATGCGCAATATCGCTCGACCGTGCTCGGCGCGTTCCAGAATGTCGCCGACGTCCTTCATGCGCTGGAGAGCGACGGTCAGGCGCTCGGCGCGTCGCAGACCGCGCTCGATGCCGCGCAGCGCAGCCTCGACATCGCCCGCCGCCAATATAGCGGTGGCGCGATCGCTTATCTCACATTGCTCAATGCGCAGGTCGCGGTACGGCAAAGCGAGGGTGCGCTGATTCAGGCCGAGGCCGCGCGGATGCAGGATACCGTGGCGCTCTATCAGGCGCTCGGCGGCGGGTGGAACGGGCCCGGCGCGCCGGTGGCGGCGAATGCGCCCGCGAACGGGCGATAA
PROTEIN sequence
Length: 219
SVGLGISLPRELPMSLPSQLVNQRPDIRSAEANLHAASAAVGVAIANRLPQLTLSAAAGGQSNLWSTILSAANHFWSIGAGIAQPIFQGGALLHKQRAAEAGYKQADAQYRSTVLGAFQNVADVLHALESDGQALGASQTALDAAQRSLDIARRQYSGGAIAYLTLLNAQVAVRQSEGALIQAEAARMQDTVALYQALGGGWNGPGAPVAANAPANGR*