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SCN18_14_9_16_R4_B_scaffold_1237_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(3209..5518)

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel protein n=1 Tax=Sphingomonas wittichii RepID=UPI000306DAA7 similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 759.0
  • Bit_score: 918
  • Evalue 3.50e-264
Uncharacterized protein {ECO:0000313|EMBL:GAO53475.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 764.0
  • Bit_score: 923
  • Evalue 1.20e-265
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 759.0
  • Bit_score: 916
  • Evalue 5.00e-264

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2310
ATGACCGACGTTATCCAGCCGCGCCGTCTGGCGTGCCGCACGTTGCTTGCCGCCACCTTCCTGAGCGGGCTCGCCACACCGGCCTTTGCACAGAATGCGCAACCCGCATCCGCCACCAGCGATGCCGATATCGTCGTCACCGCGCTGAAGCGCGACACGCGCCTGCAGGAAACCCCGATCGCGATCTCCGCAGTATCGGCACAGACGATCGCCAATTCGGGCGTCCAGAATATCGCCGACCTGCGCAGCCAGGTGCCGAGCCTCAACTTCGTCGACGGTGGCCCGTCCAATCGCCGCGTCGTGATCCGCGGCATTCAGGCGAGCGGCGAACCGACCGTCGGCGTCTATTATGACGAAACCCCGGTGACCGGGACGGTCGGCGCGAGCAACGACGCGGGCGGCTCGACCCCCGAGCTTCGCCTGTTCGACGTCGAGCGCGTCGAGGCGCTGCGCGGGCCGCAGGGCACGCTCTACGGCTCGGGCTCGATGGGCGGCACGCTGCGCATCATCTACAAGAAGCCGAGCTATGAACTGGGCGCCGATTTCGACGGCAGCATGTCCGGCACGCGAAACGGCGGCGCGAACCAGGAAATGAACGGGATGATCAACGTCCCGATCGTCGACCAGAAGGTCGCGTTCCGCGTGGTCGGCTTCTACAAGCGCAACTCGGGCTATATCGACAATACGTGGCTGCGCGTGAACAACATCAACGCCGAGGAAAGCTACGGCGGGCGCGTGATGCTGCGCATCCAGCCGGTCGAGCAATGGACGATCGACGCCGCGGCTTATTACAACAAATCGACCACCGACACGCCGACCTGGCTGCTGGAGAGCGGCAAGTACAAGACCGATTCCCGCACCCGTCAGGTCGTCCGCGACGAGGTGAAGCTCTACAGCCTGACGAGCAATTACGATTTCGGCCCGGTCATCGCGACCGGCGTGGTTTCCTATATGGAGCGTAATCTGGTCAGCCAGAGCGACACCTCGCGCTTCATCCAGGGAACGAACACGCTCGCGGGCTATAATGCGCGCTGCTTCACCGCGGGCGCGCCCAACGGCTGCACCGATCAGTTCCTCAATCCGATCACCTCGTTCCAGCAATATCAGGCGTTCGTCGCCGGCCAGTCGACCAGCTCGCTTTATCCGCAACAGGATCTGAACGCGCTGACCGCCGAATTGCGGCTCAGCTCGGCCGGCAAGGGGCCGATCCACTGGACGGTCGGCGGCTTCTACTCGCGCCGCCGCACCGATGTCGCCAACCCGCAGCTCAACGTGAACCCGCTCAACGGCTATGTCATCCCCGATCAGATCGACACGATCCGCTTCATCTACGACCAGCTCAAGCAGGTCGCGGCGTTCGGCGAACTTTCGTGGGATCTCACCTCGCGGCTGAACATCACCGGCGGCGTGCGCTATTTCAAATATACCAAGAATGTCGTCGGCCACACCGATGTGCCGTCGATCCTCGTCGGCGCGCGGATCACGCCGCCCACCTATCTGTCGTCGAGCGAAGACGGCACGGTGGTGAAGGCCAACGTCTCGTACAAGATCACCCCGGACATCATGTTCTATGCCGAAGCGGCGCAGGGCTTCCGCCCCGGCGGGGTCAATCAGGTGCTTGGGCTGGCGACCTCGCTGACGCCGTATCGCTCGGATTCGCTGTGGAATTACGAGGCCGGCTTCAAGACCGCCTGGTTCAACCACAAGCTGATCGTCAACCTCGATGCCTTCCGCATCGACTGGACCAACATGCAGGTGACCCAGCGCACCCCGAACGGCGCTTTCTCCTATATCGGCAACGCCGCCGCCGCGCGGGTGCAGGGGATCGAGTTCGAGACGTCGATCCAGCCGGTTCACGGTTTCACCATCAACGGCAATGCGACCTATATGACCGCCAAGCTGACCGAGGATCAGCTTGCCCCGAACCTCGCGACCACCAGCTCGGGTCGCGCGGGGGATCGTATCCCTTATGTGCCGAAATTCACCGCAGGGGTCGGCGCGCAATATACCTGGCCGCTGTTCGGCGAGGTCAACGGGCTGGTTCGCGGGGACTTCAGCCATTCGAGCGGCTATTATTCCGATTTCCGCCCGACCTATGTCTATACCCGCTACATCAACGGCTATGAGATGGTGAACACCCGGATCGGCATCGAGAAGCCGAACGACTGGGGCGCCTATATCTTCGTCAACAATCTGTTCGACGTGCTGGCGATCTCGCGCGAGACGTCGAGCGCGATCGGCGTCGGGCTGACCAGCGTCACCTCCGCCCGGCCGCGCACGATCGGGCTCAACCTGCGCAAGTCCTTCTGA
PROTEIN sequence
Length: 770
MTDVIQPRRLACRTLLAATFLSGLATPAFAQNAQPASATSDADIVVTALKRDTRLQETPIAISAVSAQTIANSGVQNIADLRSQVPSLNFVDGGPSNRRVVIRGIQASGEPTVGVYYDETPVTGTVGASNDAGGSTPELRLFDVERVEALRGPQGTLYGSGSMGGTLRIIYKKPSYELGADFDGSMSGTRNGGANQEMNGMINVPIVDQKVAFRVVGFYKRNSGYIDNTWLRVNNINAEESYGGRVMLRIQPVEQWTIDAAAYYNKSTTDTPTWLLESGKYKTDSRTRQVVRDEVKLYSLTSNYDFGPVIATGVVSYMERNLVSQSDTSRFIQGTNTLAGYNARCFTAGAPNGCTDQFLNPITSFQQYQAFVAGQSTSSLYPQQDLNALTAELRLSSAGKGPIHWTVGGFYSRRRTDVANPQLNVNPLNGYVIPDQIDTIRFIYDQLKQVAAFGELSWDLTSRLNITGGVRYFKYTKNVVGHTDVPSILVGARITPPTYLSSSEDGTVVKANVSYKITPDIMFYAEAAQGFRPGGVNQVLGLATSLTPYRSDSLWNYEAGFKTAWFNHKLIVNLDAFRIDWTNMQVTQRTPNGAFSYIGNAAAARVQGIEFETSIQPVHGFTINGNATYMTAKLTEDQLAPNLATTSSGRAGDRIPYVPKFTAGVGAQYTWPLFGEVNGLVRGDFSHSSGYYSDFRPTYVYTRYINGYEMVNTRIGIEKPNDWGAYIFVNNLFDVLAISRETSSAIGVGLTSVTSARPRTIGLNLRKSF*