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SCN18_14_9_16_R4_B_scaffold_2999_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(760..2163)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFC3_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 464.0
  • Bit_score: 653
  • Evalue 1.30e-184
RND transporter {ECO:0000313|EMBL:AJR23455.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 462.0
  • Bit_score: 661
  • Evalue 8.70e-187
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 464.0
  • Bit_score: 653
  • Evalue 3.60e-185

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGCGGGGTAAACGCGCGGGCCTGTCGCTCGCTGTCGTCGCCTTGCTCGGCGGATGCTCGATGGCCCCGGCCTATCGCCCGCCGGCGATCGCGGCGCCCACCGCCTATAAGGAAGTGCCCGGCTGGACCGCCGCCACCCCGCTCGACGCCGCATCGCGCGGCGCGTGGTGGGCAGCGTTCAACGACCCCATTCTCGACGATCTCGAAACCCGCGCCGCCGCCGCCAGCCCGACGCTCGCTGCCGCGCTGGCGCGCTATGACGCGGCGCGCGCGACGGCGCGGGTCGACAATGCCGATCTGTTCCCGACGATCGGCGCCAGCGGGCAGGCCGGACGCCAGCGGCTCTCCGCCAATCGTCCGCTGACCAACGGCACCGCCAGCACCTATGACAATTATGTCGTCGGCGGCGCGTTGAGCTACGAAATCGACCTGTGGGGCCGGGTGCGCAACAAGGTCGCCGCGGCGCGCGCCGATGCCGCGGCGAGCGCGGGCGATCTCGCCTCGGCGCGCCTGAGCCTGCAGGCGGCGGTAGCCGATGCCTATGCCCGGCTGCGCGGGCTCGATGCCGAGGCCGATCTGCTGCGCCGTTCGGTCGATGCCTTCAACCGCGCCTATGAACTGACCGCGACGCGCCACGACGGCGGGCTCGCCTCCGGGGTCGACGTCAACCGCGCGCGCACCGTACTGTCCAATGCGCGCGCGCAAATCTCCGCGGTCGCCAGCCAGCGCGCCGCGACCGAGCATGAGATTGCCGCGCTGATCGGCGCGGTCGCCTCGGACTTCACCGTCGCGCCGCGCATCCAGCCGCCGGGGACGCTCGCGGTCCCCGCCGAAGCGCCCTCCGCCTTGCTCCAGCGCCGGCCCGATATCGCTGCGGCGGAACGACGGATGTTCGCCGCTAATGCGCGGATCGGGGTGGCGCGCGCCGCGTTCTTCCCGACGCTGTCGCTCGGCCTTTCCGGCGGGTGGCAGACGACCGGCCCGTCGCTGCTGTCCACCCCCAGCGCCTTCTGGGGGCTGGGGCCGCTGGTGTCGGCGCTGACCCTGTTCGACGGCGGGCGCCGCCGCGCCGAGGTCGGCCTGTCGCGCGCGCAATATGACGAAGCGGCGGCGGATTATCGCGACACCGTGCTCGGCGCATTCCGCCAGGTCGAGGATGCGCTCGCCGCCGGGCGCTATCTCGCGACCCAGGCGGTCGAGCAGCGCGACGCCGCCACCGCGGCGCAGCGCACCAGCGACCTTGCGCTGACCCGCTATCATGACGGGGCCGCGGACTATCTCGAGGTGGTTACCGCGCAGACCGAGGCGCTCGATTCCGAACGCGCGCTGATCGCGGTGGAGACCAGCCGGATGCGCGCCGGCATTGCGCTGGTGAAGGCGCTGGGCGGGGCGCCGACCGCCTGA
PROTEIN sequence
Length: 468
MRGKRAGLSLAVVALLGGCSMAPAYRPPAIAAPTAYKEVPGWTAATPLDAASRGAWWAAFNDPILDDLETRAAAASPTLAAALARYDAARATARVDNADLFPTIGASGQAGRQRLSANRPLTNGTASTYDNYVVGGALSYEIDLWGRVRNKVAAARADAAASAGDLASARLSLQAAVADAYARLRGLDAEADLLRRSVDAFNRAYELTATRHDGGLASGVDVNRARTVLSNARAQISAVASQRAATEHEIAALIGAVASDFTVAPRIQPPGTLAVPAEAPSALLQRRPDIAAAERRMFAANARIGVARAAFFPTLSLGLSGGWQTTGPSLLSTPSAFWGLGPLVSALTLFDGGRRRAEVGLSRAQYDEAAADYRDTVLGAFRQVEDALAAGRYLATQAVEQRDAATAAQRTSDLALTRYHDGAADYLEVVTAQTEALDSERALIAVETSRMRAGIALVKALGGAPTA*