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SCN18_14_9_16_R4_B_scaffold_3063_7

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(5552..5905)

Top 3 Functional Annotations

Value Algorithm Source
large conductance mechanosensitive channel protein MscL n=2 Tax=Sphingomonas melonis RepID=UPI00036958FC similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 115.0
  • Bit_score: 182
  • Evalue 2.10e-43
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 115.0
  • Bit_score: 182
  • Evalue 3.00e-43
mechanosensitive ion channel protein MscL similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 115.0
  • Bit_score: 166
  • Evalue 4.40e-39

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATCGTCACCTCGCTGACCGAAGATGTGATCATGCCGGTGATCGGGAAGATTTTCGGCGGGCTGGATTTCTCCAGCTATTTCATCGTGCTCGGCACGGTGCCGGAAAAGCTGCAGGGATCGACCGATTATGCCGCGCTCAAGAAGGCGGGCGTGCCGTTGCTCGGTTATGGCCAGTTCATCACCCAGGCGGTCAATTTCCTGATCATCGCCTTCATCATCTTCCTGATGATGCGCGCGGTGAATCGCCTGATGACCAAGCCCGAGGCGGCCCCGGCCGAGCCGGCGCCCGAGCCGGCCGATGTCGCGCTGCTGCGCGAAATCCGCGACGAGCTGCGCGCGCGCCGCGGGGAGTAA
PROTEIN sequence
Length: 118
IVTSLTEDVIMPVIGKIFGGLDFSSYFIVLGTVPEKLQGSTDYAALKKAGVPLLGYGQFITQAVNFLIIAFIIFLMMRAVNRLMTKPEAAPAEPAPEPADVALLREIRDELRARRGE*