ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1833_8

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 6537..7958

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI00036FB985 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 473.0
  • Bit_score: 755
  • Evalue 1.90e-215
Response regulator {ECO:0000313|EMBL:EZP50927.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 473.0
  • Bit_score: 762
  • Evalue 2.10e-217
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 473.0
  • Bit_score: 753
  • Evalue 2.00e-215

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGACGCGCAACGGTCAACGGCTCTTAATGCTGATCGAGAATGAGGCGGCGCAACGCCGCCTTGTCGCGGCGTTGGCGGCGCGTGGCGGATGGCGCACGGTGTTCGCCGACGACGGCGAAATGGCGATTGCCATGCTCGGCACGCAGGAGGGGATGCAGCTCGACGCGATCCTGCTCGATCATTGGGACGAGGATGACGATGCCAGCGAGGTGATCGCCGAGCTGCGCAGCCGCCGCCCCGCTTTGCCGGTCATGATGATGACCGCCAACGGCTCGGTCGCGCATGCCGTGTCGGCGATGCGCGCCGGGGCGACCGATTTCCTGGTCAAGCCGCTCGCGCCGGAACGGCTGCTCGCCGCGCTCGAGGCCGCGGTTGCCGGCACCGAGGCGGGCGAGTTGCGCCCGCTGACCGAAAAGATCCCGGCGATGCTGGGGTTCGACGAGATGGTCGGCGCGGCGCGCGATTTCCGCGCCGCGCTGGCTATCGCCGCCAAGGCGGCGCGCGCGGGGGTCGCGGTGCTGATCGACGGCGAGAGCGGGGTCGGCAAGGAAGTGGTGGCGGAAGCGATTCATGCTGCCTCGCCGCGCAACCGCAAGCCGATGATCACGCTCAATTGCGGTACCACCCCGGCGAATCAGGTCGAGAGCGAGCTGTTCGGGCATGAGAGCGGCGCCTTCACCGGGGCGTTCGATCGCAAGACCGGCAAGTTCGTCGAGGCCGACGGCGGCACGATCTTCATCGACGAAGTCGGCGAGATGCCGCTCGACGCACAGGTCAAATTGCTCCGCGTGCTCGAGGCGGGCGAGGTGCAGCCGATGGGCGCGCATCACGCGCGCGAGGTCGATGTGCGCGTGATCGCCGCGACCAACCGCCGGCTGATCGAAGAGGTCGAGGCGGGGCGCTTCCGCGAGGATCTCTATTACCGGATCAACGCGGTGCAGGTGACGATCCCGCCGCTGCGCGACCGTACCGGCGACATTCCGGCGCTCGCCCGCCATTTGCTCGCGCGAATCGCGCGGCAGCCGGGGCTGCGCCAGTTCGGCATCACCGACGACGCGCTGGCGCTGCTGGTCGAATATGATTGGCCGGGCAACGTCCGCCAGCTGCAGAATGCGTTGTTCCGTGCGGCAGTGCTGTGCGAGGGCGATGCGCTGACGCGCAGCGACTTCCCGCAGATCGCCGCGCTCGCCGGGCGGCGCGGCCAGCCGGCGCACACTCAGCAGATTGGGACTTCGGGCGGGGTCACGCTGTTCCGCAGCGACGGCCATTTGCGCTCGCTCGAGGAAATCGAGGCCGATGTGATTCGCCTCGCGATCGGCCATTATCGCGGCCGCATGACCGAAGTGGCACGCCGGCTCGGGATCGGGCGCTCGACGCTCTATCGCAAGCTGGTTGAGCTTGGGATCGACAACGCGGCCTAG
PROTEIN sequence
Length: 474
MTRNGQRLLMLIENEAAQRRLVAALAARGGWRTVFADDGEMAIAMLGTQEGMQLDAILLDHWDEDDDASEVIAELRSRRPALPVMMMTANGSVAHAVSAMRAGATDFLVKPLAPERLLAALEAAVAGTEAGELRPLTEKIPAMLGFDEMVGAARDFRAALAIAAKAARAGVAVLIDGESGVGKEVVAEAIHAASPRNRKPMITLNCGTTPANQVESELFGHESGAFTGAFDRKTGKFVEADGGTIFIDEVGEMPLDAQVKLLRVLEAGEVQPMGAHHAREVDVRVIAATNRRLIEEVEAGRFREDLYYRINAVQVTIPPLRDRTGDIPALARHLLARIARQPGLRQFGITDDALALLVEYDWPGNVRQLQNALFRAAVLCEGDALTRSDFPQIAALAGRRGQPAHTQQIGTSGGVTLFRSDGHLRSLEEIEADVIRLAIGHYRGRMTEVARRLGIGRSTLYRKLVELGIDNAA*