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SCN18_14_9_16_R4_B_scaffold_1840_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 6929..7447

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=2 Tax=Sphingomonas melonis RepID=UPI000373560C similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 173.0
  • Bit_score: 216
  • Evalue 1.90e-53
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 169.0
  • Bit_score: 226
  • Evalue 3.10e-57
Cold-shock protein {ECO:0000313|EMBL:AIT06538.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 169.0
  • Bit_score: 226
  • Evalue 1.50e-56

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGTCTGACGCCGAACCAAGCGTGCGCGTTTCGGGCACGCTGAAATGGTTCGACGTGACGCGCGGCTTCGGCTTTCTCGTGCCGGATTCCGGCGACACCGGTGATGTGCTGATCCATTTCAGCGTGTTGCAGCCGCACGGCCGGCGCAGCCTGCCCGAACGGACGCGGGTGGAAGCGATCGCGGTGAAGCGAAACCGCGGCTATCAGGCGCTCGAAATCCTCTCGATCGACACCTCGAACGCGGTCGAGGCGGCGCCGGTGCGCGATGTCACCCGCGTCGATCCCGCCGCTCTGCTCGACGAAGCCGGCGATTGGGAGCCGGTGGTGGTGAAATGGTTCAACCGGCTGAAGGGCTATGGCTTCCTCGTCCGGCCGGGCGGCGACCAGGACATTTTCGTTCATATGGAAACCCTGCGCCGCGCCGACGTTCAGGAAGTCGAGCCCGATCAGCGACTGCGCGCGCGCGTGGTGGACGGGCGGAAAGGGCCGTTGGCGGTCGCCGTCGCGCGGGAGGACTGA
PROTEIN sequence
Length: 173
VSDAEPSVRVSGTLKWFDVTRGFGFLVPDSGDTGDVLIHFSVLQPHGRRSLPERTRVEAIAVKRNRGYQALEILSIDTSNAVEAAPVRDVTRVDPAALLDEAGDWEPVVVKWFNRLKGYGFLVRPGGDQDIFVHMETLRRADVQEVEPDQRLRARVVDGRKGPLAVAVARED*