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SCN18_14_9_16_R4_B_scaffold_2017_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(3057..3503)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c, class I n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEJ0_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 151.0
  • Bit_score: 169
  • Evalue 1.40e-39
class I cytochrome c similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 151.0
  • Bit_score: 169
  • Evalue 3.90e-40
Cytochrome c, class I {ECO:0000313|EMBL:ABQ70706.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 151.0
  • Bit_score: 169
  • Evalue 1.90e-39

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGCGATTTTCCCTGATGCTTGCGGCAGCGTCGATCGCCGCCGCGACCCCCGCGCCGGGCGCGACCGGGCAGCAGATCTTCTCGCGCTGCGCGGCATGCCATTTGCCGACCGGCGCCGGGGTGCCGGGCGCCTATCCGCCACTCCGCGGCGATGTGCGCGCGCTGGCCCGCAAAGCCGATGGGCGTCGCTATCTCGTCCATGTCGTGATCAGGGGCTTGTCGGGGCCGATCACCGTCGAGGGCAAGCCGTATCGCGGCACGATGCCGATGCAGGGCGGGCTCGACGATGAGGCGGTGGCCGCGGTCCTCACCTATCTCACCGGCACCCTCGCCACCGGGTCGGGGCCGGCGCCAACGCCATTTACCGCCGCCGAGGTGAAGCGCGTGCGCGAGGGCGCTGCGGCCATGTCGGGCGCCGATGTTGCGCGTTCCCAGCCGCGGCCGTGA
PROTEIN sequence
Length: 149
MRFSLMLAAASIAAATPAPGATGQQIFSRCAACHLPTGAGVPGAYPPLRGDVRALARKADGRRYLVHVVIRGLSGPITVEGKPYRGTMPMQGGLDDEAVAAVLTYLTGTLATGSGPAPTPFTAAEVKRVREGAAAMSGADVARSQPRP*