ggKbase home page

SCN18_14_9_16_R4_B_scaffold_4235_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2595..2981

Top 3 Functional Annotations

Value Algorithm Source
response regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B43AEE similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 125.0
  • Bit_score: 188
  • Evalue 4.20e-45
Response regulator {ECO:0000313|EMBL:EZP54790.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 128.0
  • Bit_score: 192
  • Evalue 3.10e-46
response regulator similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 128.0
  • Bit_score: 190
  • Evalue 1.80e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGAATGTCCTTTTTATTGAAGACGACCGGATGAACCGGCGCGTGGTGCGCGACATGCTGGAAGTCGCGGGCGCAGCAATGGCTGAAGCGGAAAGCGCCGAGGAAGGCCTGGCGATCCTCGATCGCGAGGATTTCGATATCCTGCTGGTCGATCTGCGCATGCCGGGCATGGACGGGATTTCGGCGATCCGGGAAATCCGCAAACGCGGCGATGCCAAGGCTTCCGTGCCGGTGATCGTCGTCACCGCCGATACCGCCCCCGATCTGCGTGAACGCTGCCTCGAGGCGGGCGCGGACGATGTGATCTTCAAGCCGGTCGCGATGGACATCCTGTTCGAATCGATGGGACGCGTGCTCGCCTCGGGCGACGACGGGATGATCCTTTAA
PROTEIN sequence
Length: 129
MNVLFIEDDRMNRRVVRDMLEVAGAAMAEAESAEEGLAILDREDFDILLVDLRMPGMDGISAIREIRKRGDAKASVPVIVVTADTAPDLRERCLEAGADDVIFKPVAMDILFESMGRVLASGDDGMIL*