ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2870_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1527..2432

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein CpaB n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPU7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 303.0
  • Bit_score: 296
  • Evalue 2.00e-77
pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 303.0
  • Bit_score: 296
  • Evalue 5.60e-78
Pilus assembly protein CpaB {ECO:0000313|EMBL:CCA93449.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 303.0
  • Bit_score: 296
  • Evalue 2.80e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCAGGGGCGCAACCTGATCGTGATCGCCATTGCGGTGGTGGTCGGCATTGCGGCGGTGATTATCGCCAATGCCTATTTCTCCGGGGTCGCAACGCGATCCGAAGAGGCTGCGAAAGAGCAGCAACTCACCAATATCGTCGTCGCCGCGCAGGATCTGTCCTTCGCCACGCCGCTGACGACCAGCAACCTGCGACTTGCCGCTTATCCGGCCAGGTCCGTGCCGGCGGGCGCCTTTGCGTCGATCGCCGAAGCGACCAAGAACGGCCGGGTCGCGTTGCGGCCGATCGTCATCGGCGAGCCGGTGCTGGCGTCGAAAGTGTCGGGGAGCAACGGCCGGGCGACGATCGCCGCCAACCTGCCGGCGGGCAAACTCGCTTATGCGGTATCGATCAACGACGTGAACGGCGTGGGCGGCTTCGTCCGGCCGGGCGATGTGGTCGATGTCCTGCTGACCCGCCCGATCCCGGGCGAGGGCTCGACCGCCAACGACAAGATGACCGATGTGGTGCTGGAAAATATCCCGGTGCTGGGCATCGATCAGGTGTCGGACGAGAATGCCACCAAGCCGGTGAGCAGCCGGACCGCGACGCTCGAGGTCGATACCGTCAGCGCGCAGAAGCTGGCGCTGGCCGGGCAACTCGGGGTGATCAGCCTCGCGCTGCGCAACGTCGCGGACCAGGTCGTCGGGACTCGTCCGACGGTGCTCCCGCGCCAGTTGAGCGCAACCAATTTCGTCATTCCGGCGAAGCGCGGCCCCAATCCGGTGTCGTCGTTGCCCCGGTTGCCGCTGCCGCAGCTTGCGGGCGGCTTGTCCCGTCCATCGGTCGTGCTTCGGCCGGGTCCGGCGATGACCGTGATCCGCGGCACCACCGTCAGCGAATATGGGGTGCAGCATGGCCAATGA
PROTEIN sequence
Length: 302
MQGRNLIVIAIAVVVGIAAVIIANAYFSGVATRSEEAAKEQQLTNIVVAAQDLSFATPLTTSNLRLAAYPARSVPAGAFASIAEATKNGRVALRPIVIGEPVLASKVSGSNGRATIAANLPAGKLAYAVSINDVNGVGGFVRPGDVVDVLLTRPIPGEGSTANDKMTDVVLENIPVLGIDQVSDENATKPVSSRTATLEVDTVSAQKLALAGQLGVISLALRNVADQVVGTRPTVLPRQLSATNFVIPAKRGPNPVSSLPRLPLPQLAGGLSRPSVVLRPGPAMTVIRGTTVSEYGVQHGQ*