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SCN18_14_9_16_R4_B_scaffold_2889_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(5546..6334)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDCA similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 262.0
  • Bit_score: 328
  • Evalue 5.30e-87
TonB-denpendent receptor {ECO:0000313|EMBL:KGB58591.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 265.0
  • Bit_score: 352
  • Evalue 4.80e-94
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 262.0
  • Bit_score: 351
  • Evalue 1.70e-94

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
GATACATGGAATATCGGCGCGGTCTTCTCGCCGCGCTTCCTGCCCGGCTTCAGCGTCTCGGTGGATTATTTCCGCATCAAGATGAAGAATGCGATCGGCACGCTGAGCGCGCAGGAGATCATCAATCGCTGCTTCGACGGGCGGCAGGAATATTGCAACGCCTATACGGTCGCGCCGCCGCCGCTGTCGTCGCCGGGCACGCCCTATCTGCTGTTCCGCGCGCAACCGTTCAACTTCACCAGCCAGCTGGTGCGCGGGATCGATTTCGACGCCTCGTACCGCATCCCGATCGGCAAGGGCGACAGCTTCACGCTGCGCGGGCTGGCGACGCGCTATATCGACAATATCATCGATCAGGGCATTCCGGGCACCGTGCCGCTCAACAGCGTCGGGGTGAACGGCAGCCAGACCGGCACGCCGAAATGGCTCTACCGCGTCAACGCCACCTATGATTCCTCGTCATTCTCGATCACCACGGTGGCGCGCGGGACGAGCGCGGGGCGCTATGACATCGGCGGCATCGAGTGCCAGACCAATTGCCCGCTCTCGACCACGCAATTCCCCACCTATGACAACAATCGCATCAAGGGGACGTTCTACGTCGATCTCAACCTGACCGCGAAGATCGCGATCAGCCAGCCCGGCGACGGCGAGATCTTCTTCAACATCACCAATTTGTTCGATGCCGGCCCGATGCTGGTGCCCGAAACCGGGCTGGCCGCGAATTCGACCTATAGCGACCTGCTCGGCCGCACCTTCCGCGTCGGCTTCCGCGTGCGGACACGATAG
PROTEIN sequence
Length: 263
DTWNIGAVFSPRFLPGFSVSVDYFRIKMKNAIGTLSAQEIINRCFDGRQEYCNAYTVAPPPLSSPGTPYLLFRAQPFNFTSQLVRGIDFDASYRIPIGKGDSFTLRGLATRYIDNIIDQGIPGTVPLNSVGVNGSQTGTPKWLYRVNATYDSSSFSITTVARGTSAGRYDIGGIECQTNCPLSTTQFPTYDNNRIKGTFYVDLNLTAKIAISQPGDGEIFFNITNLFDAGPMLVPETGLAANSTYSDLLGRTFRVGFRVRTR*