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SCN18_14_9_16_R4_B_scaffold_3773_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1937..4246)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489F71 similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 769.0
  • Bit_score: 1105
  • Evalue 0.0
TonB-dependent receptor, plug similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 769.0
  • Bit_score: 1021
  • Evalue 1.10e-295
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABP64584.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 769.0
  • Bit_score: 1021
  • Evalue 5.40e-295

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2310
ATGCGGTTTTCGCGCGCGATGTTGCTTGGCTATTCGGCGGCTGTGGCATTGTGCCCGGCCATGGCCCGGGCGCAGGAACAGGCCCCGCCCCCGACCGATCAGACCAGCCGTGCACCGACCGGACTGAGCGATGTCGTCGTCACCGCGCGGCGCACCGAGGAAAAGCTGCAGGATGTCCCCGCCGCGGTCACCGGCTATAATGAGGCGCAACTCGCCGCGCTCGACATCAAGAGCTTTGCCGATATCGGCAAGACCGTTCCCAATCTCGACGTGCAGCGCCAGTTCGGCTCGGCCAGCGCCCCGCAATTCTACCTGCGCGGGATTTCCACCGGTTCGCTGAAGTTCGAGACCGACGCCGGGATCGGGCTGTACATCGACGGCGTCTATCTCGGCCGCCCGGCCGGCACCGCCTTCGACCTTGCCGATATCGAGCGCGTCGAGGTGTTGCGTGGCCCGCAGGGCACCTTGTTCGGGCGCAATTCGACCGGCGGCGCGATCAATTACATCACCGCCGCGCCGACCGGGGTGCTCGGCATCAAGGCCGAGGCGACGGTCGGCAATTTCAATCAATATGGCGGCAAGATCACCGTCAACCTGCCCGCGATCGGCCCGCTGTCGGTGCGCGTCAGCTATCTCCATGATCAGCATGACGGCTATGTCCGCAACCTGACGCCGGGGCGCACCTACACGTTCGCCGCGCCGTTCGGCACGATCCGCTCGGCCGACAGCTTCGGCGCGGAGAATACCGATGCGATCGGCGTCGCCGCGCGGCTCGATCTCGGGCGGTTCGTGGCGGATTATAAATTCGATTATACCGACAAGGTCAGCACCCAGCTCGGCCAGCAATTGCTCGGTTTCGATCCGAGCTTCGCCGCCACCGCCGCGGCGATCTATCGCGGATCGAGCGTCGTCATCCCGCCCTCGACCACGCGGCAGGATGCGCTGCCGCTCGATTTCAACACCCCCTCGCATCTGCGCATCCAGGGCCACAGCCTGACGCTGCGCTATGACGTGACCGACGATATCTCGATCAAGAGCATCACCGCCTATCGCAAGCTCGACGAATTCGTCGGCGGCAACGATATCGACGGCGCGGCCTTGGTCGATCCGTTCACCGGCACCGGGCAGCCGTTCACCGTGATCAGCAGCGTCGAGGATCGCCACCAGCATCAATGGAGCGAGGAAGCGCAATTGCTCGGCAAGACCGGGCGGTTCGACTGGATCCTCGGCGGCTTCTGGTTCCGCGAGGTCGGGCGCGACAACAACCCCGTGTTCCTCGGCGATCTGTTCCCGACCAATGGCACGATCGTGCCGAGCCAGGGCCCCGGCACGGGGACGACGACCAGCCTGTTCGGGGTGCCGAGCGACTATCTCGCCGGGTCGAACGTCGCGGTGCGCAACACGTCGATCGCGGGCTATGGCCACCTCGCCTACAAGGCCGAGCATTTCGAGCTGGCCGGCGGGTTCCGCTACACCAAGGACGACCGGCTGGAAACGATCATCGACGGCGGGTTGCGGCCGTTCGCCATCCCCTCGGCAACCTTCACCGCATCGAGCGATCACTGGGATTTCGACGCCACCGCGACATGGATCTTCAACCCCAATATGCGCGCCTACGCACGCTTCGCGACGGGTTATCTTTCCGGCGGCGTGGTCGGCGGCATCCCGTTCAAGCCCGAGACGATGAACAGCTATGAAATCGGCTTCAAGGGCGATCTGATCGGGCGGACGCTGCGCATCAACGCGGCGCTGTTCCACGCCGACCGGCGCAATGTGCAGACGCTGGCGTTCACCGCCGCGGCGGGCACCTATATCATCTCCGCCCCCAAGGCGCGCGAGAATGGCTTCGAGCTGGAGCTGACCGCGCTCCCCACCGCCGGGCTGACCTTCAACGCCTCGTTCGGCTATCTCGACAACAAGCTGTCGCCCGATCCGGTCAATGGCCCGGTCAATTCGCTGGCGCCGCGGTTCACCACCAGCGTCGGCGGGCAATATGATTTCGCGCATTTCTCGAACGGCAGCTACGCCTCGTTCCGCATCGACGGCTTCTTCCGCGACAAGCGGCTGAGCGATCCGTTGCCCAACAGCGCGACCTCGGCGCTCACCACCCTGCCGTCGCGGTTCGACATCAATGCGCGGCTGTCGGTGTTCGACCTGCCGGTTGCCGGAACCAAGGTGAAGGTCAGCGCCTGGGTACAGAATCTCACCGACAACAAGGCGCTGGAATTCGCGCGCAACCTGTCGACCACCGTGATCGGCGTCTATCAGGTGCCACGCACCTTCGGGCTGACCGCCGGCTTCTCATTCTGA
PROTEIN sequence
Length: 770
MRFSRAMLLGYSAAVALCPAMARAQEQAPPPTDQTSRAPTGLSDVVVTARRTEEKLQDVPAAVTGYNEAQLAALDIKSFADIGKTVPNLDVQRQFGSASAPQFYLRGISTGSLKFETDAGIGLYIDGVYLGRPAGTAFDLADIERVEVLRGPQGTLFGRNSTGGAINYITAAPTGVLGIKAEATVGNFNQYGGKITVNLPAIGPLSVRVSYLHDQHDGYVRNLTPGRTYTFAAPFGTIRSADSFGAENTDAIGVAARLDLGRFVADYKFDYTDKVSTQLGQQLLGFDPSFAATAAAIYRGSSVVIPPSTTRQDALPLDFNTPSHLRIQGHSLTLRYDVTDDISIKSITAYRKLDEFVGGNDIDGAALVDPFTGTGQPFTVISSVEDRHQHQWSEEAQLLGKTGRFDWILGGFWFREVGRDNNPVFLGDLFPTNGTIVPSQGPGTGTTTSLFGVPSDYLAGSNVAVRNTSIAGYGHLAYKAEHFELAGGFRYTKDDRLETIIDGGLRPFAIPSATFTASSDHWDFDATATWIFNPNMRAYARFATGYLSGGVVGGIPFKPETMNSYEIGFKGDLIGRTLRINAALFHADRRNVQTLAFTAAAGTYIISAPKARENGFELELTALPTAGLTFNASFGYLDNKLSPDPVNGPVNSLAPRFTTSVGGQYDFAHFSNGSYASFRIDGFFRDKRLSDPLPNSATSALTTLPSRFDINARLSVFDLPVAGTKVKVSAWVQNLTDNKALEFARNLSTTVIGVYQVPRTFGLTAGFSF*