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SCN18_14_9_16_R4_B_scaffold_4112_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 94..1047

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCH3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 317.0
  • Bit_score: 308
  • Evalue 5.30e-81
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGD57745.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 317.0
  • Bit_score: 308
  • Evalue 7.40e-81
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 309.0
  • Bit_score: 285
  • Evalue 1.40e-74

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGTCGACGACATCGAGACGGTGGATTTCCTGCTGGTGGAGGGCTTTTCGGCGCTCGCCTTTTTCTCCGCGGTCGAGCCGTTGCGTGTCGCCAATCGCATCGCCGGCAAGACGATTTTCGCCTGGCGGCTCCACGCCGAGGATGGCGCGCCGGTCGCGGCGTCGAGCGGGATGCGCTTTCCGGTCGATCGCCCACTCGCCGCGGTGAGCGCCCCCGGCACGCTGATCGTCTGCGCCGGTTTCCGCCCCGACAAGGCGATCGGCCGCGCGGGGCTCGCCGCGCTGCGCCGCTTCGCGCATGACGGCGGGCGGCTCGGCGCGCTCGATACCGGGGTGGAGATCCTCGCGCGCGCCGGGGTTGCCGGGCGCGGGCCGGTGGCGATCCACTGGGAGGCGGCGCCCGAGTTTCGCGAGCGCTGGCCCGATATCCCCGTCACCGATGCGCTCTACGCGATCGGCGAGCGGGTGTTCACCTGCGCCGGGGGGACGGCCGCGCTCGACATGATGCTCGAACGGATCGCCGACAGCCGCGGCCGCGCCTTCGCCCATGCCGTGTCGGAACAGTTCATCCACGATCGCATCCGCCGCGCCGGCGAGGCGCAACGCATGGCGCTCGACCGCCGGCTGGCGGTGCGCAACCGCGCGGTTTTGGGGGTGATCGCGATGATGGAGGCGCATCTCGACGCGCCGCTCGCCTCGCCCGTACTGGCGGCGCGCGCCGGGCTGTCGGTGCGCCAGATCGAGCGGTTGTTCGACACGCATCTCGGCATGGCGCCGCAGGATTATTACCGCCGGCTGCGGGTGGAGCGCGCCCGTGCGCTGATCGAGACGACCGACCTGCGCGTGCTCGATATCGCGCTGGCGACCGGGTTCGATTCGGCCTCGGCGCTGGCCCGCACGTTCCGCCGCACGTTCGGCGCGAGCCCCGCATCGTTGCGCAAGCCGGCGCGGTAG
PROTEIN sequence
Length: 318
MVDDIETVDFLLVEGFSALAFFSAVEPLRVANRIAGKTIFAWRLHAEDGAPVAASSGMRFPVDRPLAAVSAPGTLIVCAGFRPDKAIGRAGLAALRRFAHDGGRLGALDTGVEILARAGVAGRGPVAIHWEAAPEFRERWPDIPVTDALYAIGERVFTCAGGTAALDMMLERIADSRGRAFAHAVSEQFIHDRIRRAGEAQRMALDRRLAVRNRAVLGVIAMMEAHLDAPLASPVLAARAGLSVRQIERLFDTHLGMAPQDYYRRLRVERARALIETTDLRVLDIALATGFDSASALARTFRRTFGASPASLRKPAR*