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SCN18_14_9_16_R4_B_scaffold_1695_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3158..4315

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5D2 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 384.0
  • Bit_score: 490
  • Evalue 9.10e-136
DNA, contig: SP636 {ECO:0000313|EMBL:GAN14345.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 390.0
  • Bit_score: 483
  • Evalue 1.60e-133
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 376.0
  • Bit_score: 337
  • Evalue 2.80e-90

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGCATGATGTGACCATTCCGGCGAAAGCCCCGCGCGGGCTGAAGCAGGCGGGGATCGTCGCGGTGCTGGTCGCGGCGGGCGTGGTCGTCGCGGGGGTGGTCGTGCGCGGCCATGACGTCGACACCGCGACGCATGTCTCCGATGCGCAATCGATCCCCACCGTCCATCTGATCGCGGTGAAGGGCGATACCGCCGCTGACACGCTCGACCTTCCCGGCACGATGCAGGCGTGGAATGCGGCCAAGCTCTATGCGCGGGTCGCGGGCTATGTGCGCGGCTGGGAGAAGGATATCGGCGCGGAGGTGGCGGCGGGCGCCCCGCTCGGCACGATCGACACGCCCGAACTCGATCAGCAGATCACCGATGCGCGCGCCGCGGTCGCCAGCGCCAGGGCGCATGCGGCGCTCGCGCACAGCACCGCCGCGCGCTGGAACGACCTGCTCACCACCGCCTCGGTCTCCAAGCAGGAAGCCGATGAGAAGAACGGCGACCTCGCCGTCCGCGTCGCGGCGGTGAAGGAGGCGGAGGCGGCACTCGGCCGGTTGCAGGCGATGAAATCCTTCGCGGTGGTCCGCGCGCCCTTCGCCGGGGTGGTGACCGCGCGCAACGCCGATATCGGCGATCTCGTCGGCCCCGGCAGCGGCGGCGCGCAACAACCGATGTTCGCGGTCGCCGATACGCGGCGGATCCGCGTCTATGTCAGCGTGCCGCAGGCCGATTCCGCCGCGATCCACCCCGGCATGGCCGCGACATTGAGTGTCCCCGCCTTCCCCGGCCGCAGCTTCCCGGCGCATGTCACCGGGGCATCGGGCGCGGTCGATGCGCAGAGCGGGGCGTTCCAGGTCGAATTGCAGGCCGACAATCCCGGCGATCTGCTCAAGCCCGGCGGGTTCGCGCGCGTCGTGTTCGATCTCCCCGGTTCGGCCGGCGGGGTCGAGGTGCCATCGAGCGTGCTGCTGTTCCGCGCCGGCGGCAGCGAGGTGGCGACGGTCGATGCGGGCGGGCATATCCGGCTGCGTCATGTCCAGATCGGGCTCGATCGCGGGCAGACGGTGCAGATCCGCGCCGGCCTCTCCGCCGGCGAGCGGATCGTCGACAATCCGCCGGATTCGCTCGCCGAGGGCGAACTGGTCCGCGTCGGAGGCGCGCGTGGCTAA
PROTEIN sequence
Length: 386
MHDVTIPAKAPRGLKQAGIVAVLVAAGVVVAGVVVRGHDVDTATHVSDAQSIPTVHLIAVKGDTAADTLDLPGTMQAWNAAKLYARVAGYVRGWEKDIGAEVAAGAPLGTIDTPELDQQITDARAAVASARAHAALAHSTAARWNDLLTTASVSKQEADEKNGDLAVRVAAVKEAEAALGRLQAMKSFAVVRAPFAGVVTARNADIGDLVGPGSGGAQQPMFAVADTRRIRVYVSVPQADSAAIHPGMAATLSVPAFPGRSFPAHVTGASGAVDAQSGAFQVELQADNPGDLLKPGGFARVVFDLPGSAGGVEVPSSVLLFRAGGSEVATVDAGGHIRLRHVQIGLDRGQTVQIRAGLSAGERIVDNPPDSLAEGELVRVGGARG*