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SCN18_14_9_16_R4_B_scaffold_3351_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2777..3586)

Top 3 Functional Annotations

Value Algorithm Source
linocin M18 bacteriocin protein (EC:3.4.-.-) similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 263.0
  • Bit_score: 346
  • Evalue 4.20e-93
Photosynthetic reaction center L subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H1G4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 269.0
  • Bit_score: 360
  • Evalue 7.60e-97
Bacteriocin {ECO:0000313|EMBL:KJC59637.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 269.0
  • Bit_score: 370
  • Evalue 1.30e-99

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGAACAATCTTCATCGCGAATTGGCGCCGATTTCGGCGGCGGCGTGGGACCAGATCGAGGACGAGGCCAAGCGCACGCTCAAACGCTATCTCGCCGCGCGCAAGGTGGTGGACGTGATCGGCCCCAAGGGGTTCGATCTCGCCGCGGTCGGCACCGGGCACACGCGCGAGGTCGCGTCGCTGCGCGAGGGGTTGCACGTCGTCCAGCGCGAGGTGACGCCGGTCGTCGAACTGTGCGTGCCGTTCAAGCTGACGCGCAAGGCGATCGACGATGTCGAGCGCGGCTCGAACGATTCCGACTGGCAGCCGCTGAAGGACGCGGCGGCGACGATCGCCTTCGCCGAGGATCATGTCGTGTTCGAGGGTTATGCCGCCGCCGGCATCGATGGCGTCCGCCAGGTCACCAGCAATCCGAAACTGACGCTGCCGGGCGATGTGCGCGGTTATCCCGAGGTGGTCGAAAAAGCGATCAACGCGCTGCGGCTGGCCGGGGTCAACGGGCCCTATGCGCTGGTGCTAGGCGCCGATCCCTATAGCAAGCTGACCGGCGAGAGCGATGATGGCTATCCGGTGCTCAAGCATATCGAGAAGCTGGTCGATCGCGAGGTGATCTGGTGCCCGGCGATCAAGGGCGGCGTGGTCGTCACCACGCGCGGCGGCGATTTCGACCTGACGATCGGGCAGGATCTGTCGATCGGCTATCGCCACCACACCGCCGATGAGGTGGAACTCTATATCCTCGAAACGCTGACCTATCGCACGCAAACGTCCGAAGCGTCGGTGATCCTCGACCTGCCGGCGGCGCGGTAA
PROTEIN sequence
Length: 270
MNNLHRELAPISAAAWDQIEDEAKRTLKRYLAARKVVDVIGPKGFDLAAVGTGHTREVASLREGLHVVQREVTPVVELCVPFKLTRKAIDDVERGSNDSDWQPLKDAAATIAFAEDHVVFEGYAAAGIDGVRQVTSNPKLTLPGDVRGYPEVVEKAINALRLAGVNGPYALVLGADPYSKLTGESDDGYPVLKHIEKLVDREVIWCPAIKGGVVVTTRGGDFDLTIGQDLSIGYRHHTADEVELYILETLTYRTQTSEASVILDLPAAR*