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SCN18_14_9_16_R4_B_scaffold_5485_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(321..1199)

Top 3 Functional Annotations

Value Algorithm Source
protocatechuate 4,5-dioxygenase subunit beta (EC:1.13.11.8) similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 278.0
  • Bit_score: 512
  • Evalue 4.80e-143
Protocatechuate 4,5-dioxygenase, beta chain id=2541302 bin=GWF1_Rhodobacteraceae_65_7 species=Sphingobium japonicum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 290.0
  • Bit_score: 570
  • Evalue 9.00e-160
Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 290.0
  • Bit_score: 570
  • Evalue 1.30e-159

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGCGCGGATCACCGCCGGGGTCGGCTCCAGCCATGTACCCCTGCTCGGGGTTGCGAGCGATTTCGGCAAGGATAAGGACGATTATTTCGGCCCGATCTTCGCCGGTTACGAATGGACGCGAAATTGGGAGCAGGCCGAAAAGCCCGATGTCGTGATCCTCGTCTATAACGATCACGCCTCCGCCTTCGATATGAAGGTCATCCCGACCTTCGCGATCGGCTGCGGCGAACGCTACAAGCCCGCCGACGAAGGCTGGGGGCCGCGCGCGGTGCCCGATGTCGAGGGTCATGCCGATCTCGCCTGGCATATCGCGCAGAGCCTGATCCTCGAAGAATTCGATATGACCATCATCAACGAGATGGATGTCGATCACGGCCTCACCGTTCCGCTGTCGATGATGTTCGGCAAGCCCGATGCGTGGCCGGTGAAGGTGGTGCCGCTGGCGGTCAATGTCGTCACTTACCCGCCGCCCTCGGGCAATCGCTGCTGGGCGCTGGGCGAGGCGATCGCGCGCGCGGTGGCGAGCTTCCCGGAGGATCTCAACGTGCAGATCTGGGGCACCGGGGGGATGAGCCACCAGCTTCAGGGGCCGCGCGCCGGGCTGATCAACCGTGATTGGGACAATCGCTTCCTCGATCGCCTGATCGGCGACACCGACGAACTGCGCCATGTCCCGCATATCGAATATCTCCGCGAGACCGGCTCCGAGGGGATCGAAATGGTGATGTGGCTGATCATGCGCGGCGCGCTGGGCAAGCGCACGCGCGCGCTCCACCGCCATTATCACGTCCCCTGCTCGAACACCGCGATCGGCCATATCGTGCTGCGCCCCGACAATGGCGAAGGGCTCGATATGACCGGCAGCGATCGCGCCTAA
PROTEIN sequence
Length: 293
MARITAGVGSSHVPLLGVASDFGKDKDDYFGPIFAGYEWTRNWEQAEKPDVVILVYNDHASAFDMKVIPTFAIGCGERYKPADEGWGPRAVPDVEGHADLAWHIAQSLILEEFDMTIINEMDVDHGLTVPLSMMFGKPDAWPVKVVPLAVNVVTYPPPSGNRCWALGEAIARAVASFPEDLNVQIWGTGGMSHQLQGPRAGLINRDWDNRFLDRLIGDTDELRHVPHIEYLRETGSEGIEMVMWLIMRGALGKRTRALHRHYHVPCSNTAIGHIVLRPDNGEGLDMTGSDRA*