ggKbase home page

SCN18_14_9_16_R4_B_scaffold_4992_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 156..3329

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C peroxidase n=1 Tax=Sphingomonas elodea RepID=UPI0002631E0D similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 1057.0
  • Bit_score: 1681
  • Evalue 0.0
Heavy metal efflux pump, CzcA family protein {ECO:0000313|EMBL:EIZ80880.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 1035.0
  • Bit_score: 1538
  • Evalue 0.0
cytochrome C peroxidase similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 1062.0
  • Bit_score: 1528
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3174
ATGAACCGGCTGGTCGAGCTGGCGCTGCGCCAGCGGATGCTCGTGCTCACCCTGCTGATCGGATTGATCATGGCCGGGGTGGTCGGCTTCGCCAATCTCAATATCGAGGCCTATCCCGACCCGGTTCCGCCGATGGTCGAGGTGCTGACGCAGAGCAACGGCACCTCCGCGGAGGAGATGGAGCGCAACGTCACCACCCCGATCGAAGTGGCGATCGCCGGCCTGCCGCATCTGACCGCGGTGCGCTCGATCTCGCTGTTCGGCCTGTCGGACGTGAAGATCCAGTTCACCTATGACGTGACGTTCCGCGAGGCGGAGCAGCTGGTGCTCGGTCGCCTCTCGCAAATCCCGCCGATGCCCAATGGCGCGCAGCCGACCATCTCGCCGACCAGCCCGATCGGCGAAATCTATCGCTATCGCGTCGTCGGCCCGCCCGGCTATTCGGTGATGGATCTGAAAACGCTGCAGGACTGGGTGCTTCAGCGGCGTTTCAAGCGGCTCCCCGGGGTGGTCGACGTGACCGGCTGGGGCGGCAAATTACGCACCTATGAGGTGCGGCTCGATCGCGACAAATTGATCGCGCACGGCATCACCGTGCCGCAGGTGCTGGCGGCGATCGGCAAGAGCGACGGCAATGTTGGCGGCCAGACGGTCAATTTCGGCGAGCAGGCGGCGATCGTCCGCGGGGTCGGGCTGATCCAGTCGGTCGACGGCATTCGCGACGTGATGGTCGGGATGGGCGGGACGACCCCGGTGTTCCTGCACGACGTCGGCACGATCCAGATCGGCAATATGCCGCGGCTCGGCATCGCCGGCGACGGGCAGACCGACGATATCGTGATGGGCATCGTGCTGATGCAGCGCGGTGCGCAGTCGATGCCCGCGATCCGCGCGGTCGAGCAGGAAGTCGAGACGATCAATGCCGGCGGCGTGTTGCCGCCCGGCGTGCATCTGGAGCGGATCTACGACCGCTCGAACCTGATCGGCGTCACCACGCATACGGTGATGCACAACCTCATCGCCGGTGTGGTGCTGATCTGCCTGTTGCAGTGGATCTTCCTCGGCAATTTGCGCAGCGCGCTGATCGTCGCGGTGACCATTCCCTTCGCGCTGTCGGTCGCGGTGCTGGTGCTGATCCTGCAGGGTGAATCCGCCAACCTGCTGTCGCTCGGCGCGCTTGATTTCGGGCTGATCGTCGACGCCAGCGTGATCATGGTCGAGGCGATCTTCCGCCGGATGGTCGGACGCTCGCACGATATCGGCAGCGGCCGCATCCACGCCAGCACCGCCAACCGCTTCTCCGCGATCCTCCATGCGTCGAGCGACGTCAGCCGCGGCATCTTCTTCGCCGCCGCGATCATCATCGCCAGCTTCCTGCCGCTGTTCACGCTGACCGGGGTGGAGGGGCATATCTTCGGCCCGATGGCCAAGACCTATGCCTATGCCATCGCGGGCGGGCTGGTCGCGGCATTCACCGTCGCGCCGGTGCTGTCGGCGCTGCTGCTCCCCGACAAGCTCGCCGAGGTCGATACCTGGGTCGTCCGCCATCTGAAGCGCATCACCGAGCCGGCGGTGGGCTTCGCGCTGGCCAATCGCGTGGTGACCCTGGGGATCACCGGGCTCGCGCTCGCGGCGTCGCTTTACGCGGTGCGCGCCTTGGGGGTCGAGTTCCTGCCGCATCTGGAGGAGGGCAACCTCTATATTCGCGCCAGCCTGCCGCCATCGATCTCGCTTGAGGCGGGGCAGCCGGTGGTCAACGGCATCCGTCGCATCATCGCGGTGCGCCCCGAAGTCGAGCGCGTCGTTTCCACCCACGGCCGCCCCGATGACGGCACCGATGCGACCGGCTTCTTCAACGCCGAATTCTATGCCCCGCTGAAACCGGCCGAAGACTGGCCGGCGGGCGCGAGCAAGGAAAAGCTCACCGCCGAGCTGCAACAGAAATTGCAGGCGCGCTATCCCGGCGTCGATTTCGAATTCTCGCAATATATCGAGGATAACGTCGACGAGGCGTCATCCGGGGTGAAGGGCGCCAATTCGATCAAGGTGTTCGGCAACGATCTCGAGACGCTGGAAAAGGTCGCGGGCGAGATCAAGGCGCAGATGGCGCAGGTGCAGGGCATCGCGGACCTCGGCGTATCGGATTCGCTCGGCCAGCCGACGGTGCGCATCGATATCGATCGCCGCGCCGCCGCGCGCTATGGGCTGACGCCTGACGATATCAACCAGACGGTCGCGGCCGCGGTCGGCGGGCAATCGAGCGCCGATCTCTACGAAAAGGATACCGACCGGCATTTCCCGATCGTCATCCGGCTCGATCCGTCGCAGCGCAACGATATCGACGCGCTCAACCGCATCACGGTCGGCGCGCCGTCGCCGAGCGGCACCGGGCTGATCCAGGTGCCATTGTCCGAAGTGGCAAAGATCCGCCTGACCTCGGGTGCATCGTTCATCTATCGCGAGCATCAGGAACGCTATGTCCCGATCAAGTTCAGCGTGCGCGGGCGCGATCTGGGCAGCGCGGTCGACGAGGTGAAGGCGCGGATCGCCAAACATGTCGTGCTGCCGCCCGGCTATCATCTCGAATGGGCGGGCGAATTGGGCAATCTCGCCAATGCGGTCGCGCGGCTGCAGGTCGTCGTGCCGGTCAGCCTGTTGCTGATCCTGGTGCTGCTGTTCGCCAATTTCGGTTCGATCCGCGATACCTTGCTCGCGTTCAGCGTGATCCCGATGGCGCTGATCGGCGGGGTGCTGGCGCTGGCGCTGACCGGTACGCCGTTCAGTATTTCTGCTGCGATCGGCTTCGTCGCCTTGTTCGGCATTGCGGTGATGGATGGTATCCTCGTCGTCACCACCTTCAACCAGCAGCTCAACGAAGGGCTGGAGCGCGATGAGGCGCTGGCGATGACCGTGCGGCATTGTCTGCGCCCGGTGGTGATGACCTGCCTCGCGGCGGCGATCGGGCTGTTGCCGGCGGCGATTTCGAGCGGGATCGGCAGCCAGGTGCAAAAACCGCTGGCGCTGGTGGTGGTCGGCGGGATGACGCTGGCGCCGGTGCTGATCCTGATGGTGCTGCCGGTGCTGATCGCGCGCTTCTCGCGCCACGATAGCGGGCTGTTGCATCGCGCCCGTCAACAACCAGACGCCGATCAGGCGCAGGCGGAGCCGGCATGA
PROTEIN sequence
Length: 1058
MNRLVELALRQRMLVLTLLIGLIMAGVVGFANLNIEAYPDPVPPMVEVLTQSNGTSAEEMERNVTTPIEVAIAGLPHLTAVRSISLFGLSDVKIQFTYDVTFREAEQLVLGRLSQIPPMPNGAQPTISPTSPIGEIYRYRVVGPPGYSVMDLKTLQDWVLQRRFKRLPGVVDVTGWGGKLRTYEVRLDRDKLIAHGITVPQVLAAIGKSDGNVGGQTVNFGEQAAIVRGVGLIQSVDGIRDVMVGMGGTTPVFLHDVGTIQIGNMPRLGIAGDGQTDDIVMGIVLMQRGAQSMPAIRAVEQEVETINAGGVLPPGVHLERIYDRSNLIGVTTHTVMHNLIAGVVLICLLQWIFLGNLRSALIVAVTIPFALSVAVLVLILQGESANLLSLGALDFGLIVDASVIMVEAIFRRMVGRSHDIGSGRIHASTANRFSAILHASSDVSRGIFFAAAIIIASFLPLFTLTGVEGHIFGPMAKTYAYAIAGGLVAAFTVAPVLSALLLPDKLAEVDTWVVRHLKRITEPAVGFALANRVVTLGITGLALAASLYAVRALGVEFLPHLEEGNLYIRASLPPSISLEAGQPVVNGIRRIIAVRPEVERVVSTHGRPDDGTDATGFFNAEFYAPLKPAEDWPAGASKEKLTAELQQKLQARYPGVDFEFSQYIEDNVDEASSGVKGANSIKVFGNDLETLEKVAGEIKAQMAQVQGIADLGVSDSLGQPTVRIDIDRRAAARYGLTPDDINQTVAAAVGGQSSADLYEKDTDRHFPIVIRLDPSQRNDIDALNRITVGAPSPSGTGLIQVPLSEVAKIRLTSGASFIYREHQERYVPIKFSVRGRDLGSAVDEVKARIAKHVVLPPGYHLEWAGELGNLANAVARLQVVVPVSLLLILVLLFANFGSIRDTLLAFSVIPMALIGGVLALALTGTPFSISAAIGFVALFGIAVMDGILVVTTFNQQLNEGLERDEALAMTVRHCLRPVVMTCLAAAIGLLPAAISSGIGSQVQKPLALVVVGGMTLAPVLILMVLPVLIARFSRHDSGLLHRARQQPDADQAQAEPA*