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SCN18_14_9_16_R4_B_scaffold_5041_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3078..3392

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B69B12 similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 114.0
  • Bit_score: 172
  • Evalue 1.10e-40
RNA polymerase sigma70 similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 115.0
  • Bit_score: 139
  • Evalue 4.00e-31
RNA polymerase sigma70 {ECO:0000313|EMBL:AJP73515.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 115.0
  • Bit_score: 139
  • Evalue 2.00e-30

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGAGCGCCGAACCGCATCGCGGCGCCTTCGCCGGCGCGACCCCGCTGACCTATTCGCCGCGCGCCAATGCCCGCGACGAAAGTGCGCTGGTGCGCGAGCATCTGCCGCTGGTCCGTCGCCTCGCGTGGCATATCCACGGCAGCGTTTCGACCGCGGTCGAGGTCGAGGATCTGGTGCAGGTCGGGCTGGTCGCTTTGGTCGAGGCGGTGTCCGCCTTCGAGGATCGCGGTCAGGTGACCTTCCGCCAATATCTCACCACGCGGCTGCGCGGCGCGATGAGCGACGAACTGCGGCGTCATGCCGCCATGACGCGC
PROTEIN sequence
Length: 105
MSAEPHRGAFAGATPLTYSPRANARDESALVREHLPLVRRLAWHIHGSVSTAVEVEDLVQVGLVALVEAVSAFEDRGQVTFRQYLTTRLRGAMSDELRRHAAMTR