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SCN18_14_9_16_R4_B_scaffold_8981_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1..213

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 141
  • Evalue 5.30e-32
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 141
  • Evalue 2.70e-31
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVX5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 141
  • Evalue 1.90e-31

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Taxonomy

CN-SCN_Sphingomonas_18x → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
AAGTCGCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTATTCGGGTCGTTCGGTGATCGTGACCGGTCCCGAGCTCAAGCTGCACCAGTGCGGCCTGCCGAAGAAGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTACGCCCGGCTCGACGCCAAGGGTCTGTCGATGACCTTGTAG
PROTEIN sequence
Length: 71
KSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTL*