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SCN18_14_9_16_R4_B_scaffold_6878_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2..118)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 39.0
  • Bit_score: 76
  • Evalue 5.80e-12
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RLMH_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 39.0
  • Bit_score: 76
  • Evalue 4.20e-12
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 39.0
  • Bit_score: 76
  • Evalue 1.20e-12

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 117
GTGCTGCTGCATATCGTGGCGCGCGGCCGGAGCGGCCGCTCGCCGGAGGCCGATCTGGTCGATCGCTACATGAAGCGAATCGGCTGGCCGACGAAGATCACCGAACTGCCCGATAGC
PROTEIN sequence
Length: 39
VLLHIVARGRSGRSPEADLVDRYMKRIGWPTKITELPDS