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SCN18_14_9_16_R4_B_scaffold_6548_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1..537)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein N n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287D83D similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 182.0
  • Bit_score: 188
  • Evalue 5.90e-45
Type II secretion system protein N {ECO:0000313|EMBL:KHA62850.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 175.0
  • Bit_score: 190
  • Evalue 1.30e-45
type II secretion system protein N similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 178.0
  • Bit_score: 172
  • Evalue 9.50e-41

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
GTGAACGGATTCCGCCTGAATACCGGGCGCGGCACCTTGTTCGCGGCGATTTTGGTGGTGGCGCTGATCGTCACCTTGCCGCTGCGGCTGGCGCTGGCGTGGTTCGGCGTCACCGAGGCGGGGATGACCGCGCGCGAGGTGACCGGCAGCATCTGGTCCGGCCGGCTGGTCGAGGCGCGATTCGGCCAGATCGCCTTGGGCGAGCTCGCCGCGCGGGTGGCGCCTCTGCCGTTGCTGATCGGGCATGCGCGGATCGAGCTTGCCGCGCCCGACGGCGCTGCGGGCTCGCGGCTGAGCGGGGCGATCGACGTGACGCGGCACGATATCGGGCTCAGCCATGTCACCGCCAGCCTGCCGGTCGGCAACGCCTTTTCGCCGGTGCCGGTGACCACGCTGGAGCTGGACGATGTGAGCGTTGGGTATGCCGGCGACACCTGCGAGCGCGCCGAGGGGCGGGTGCGCGCGCTGCTGACCGGCGATGTTGCCGGCCAGCGAATCCCGACGACGATGAGCGGCTCTCCGCGCTGCGACGGCACC
PROTEIN sequence
Length: 179
VNGFRLNTGRGTLFAAILVVALIVTLPLRLALAWFGVTEAGMTAREVTGSIWSGRLVEARFGQIALGELAARVAPLPLLIGHARIELAAPDGAAGSRLSGAIDVTRHDIGLSHVTASLPVGNAFSPVPVTTLELDDVSVGYAGDTCERAEGRVRALLTGDVAGQRIPTTMSGSPRCDGT