ggKbase home page

SCN18_14_9_16_R4_B_scaffold_12540_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 126..1193

Top 3 Functional Annotations

Value Algorithm Source
formyl-CoA transferase (EC:2.8.3.16) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 355.0
  • Bit_score: 553
  • Evalue 3.00e-155
Formyl-CoA transferase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EU59_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 355.0
  • Bit_score: 553
  • Evalue 1.10e-154
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:GAO55544.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 355.0
  • Bit_score: 593
  • Evalue 1.70e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
TTGGGATTGCCGACCGGCAGCGACGATCCGCAGGAAAGCGCTTATTATCTGAGCTGCAACCGCAACAAGCGCTCCGCCGCGATCGATCTCGCCAACCCGGAGGGCGCCGCGCTGATCCGCCGGCTCGCCGCCGAAGCCGATATCCTGGTCGAGAATTTCAAGGTCGGCGGACTGGTCAAATACGGGCTGGATTATGCCAGCATCAGCGCGATCAACCCGCGCATCGTCTATTGCTCGATCACCGGCTTCGGCCAGACCGGCCCTTATGCCGATCGGCCGGGCTATGATTTCGTCGCGCAGGGCATGGGCGGCTTTATGTCGATCACCGGCGAGGAACATGGCGGGCCGCTGCGCGCCGGGGTGGCGATGGCCGACCTGTCGACCGGCATGTATGCCACCGTCTCGATCCTCGCCGCGCTGCGCCACGCCGAGCGCACCGGGGAGGGGCAGCAGGTCGACGTGTCATTGCTCGATACGCAGATCGCGATGCTCGCCAATCAGGGGTCGAACTGGCTGGTCGGCGGCGTCAATCCCGGCCGGCTCGGCAACCGCCACCCGACCGTGGTGCCGTACAAGACCTTCGAGGTCGCCGACGGAGTGATCATCATCGCGATCGGCAATGACGGGCAGTTCCGCGCCTTCTGCAACGAGATGGGGCATCCTGACCTCGCCACCGATCCGCGCTTCGTGACCGGCCGCCAGCGGCTGATCAATCGCGAGGCGATCGAGGCGGCGCTGCAGGATATCGTCCGCGATCTGCCCGGCGGCCCGCTGATCGAGCGGCTGGTGGCGATCAACGTGCCGGCGGGGCCGGTCAATACGATCAGGGATATCTACGCCGATCCGTTCATCGAGGCGCGCGGCGTGGTGCATCGCTTCGTGCGCGAGGACGGGGTGGAAATCCCGACCGTCGCCTTTCCGGGCAAATTCTCCGCCACGCCGACCGATTATCGCTATCGCCCGCCGCAGGTGGGGGAGCATACGCGCGAATTGCTCGGCGACTGGCTGGGGCTGTCCGACGCGGACTTCGCCGGGCTGGAGGAAAAGGGCGCGGTCAGGCAGCGCTGA
PROTEIN sequence
Length: 356
LGLPTGSDDPQESAYYLSCNRNKRSAAIDLANPEGAALIRRLAAEADILVENFKVGGLVKYGLDYASISAINPRIVYCSITGFGQTGPYADRPGYDFVAQGMGGFMSITGEEHGGPLRAGVAMADLSTGMYATVSILAALRHAERTGEGQQVDVSLLDTQIAMLANQGSNWLVGGVNPGRLGNRHPTVVPYKTFEVADGVIIIAIGNDGQFRAFCNEMGHPDLATDPRFVTGRQRLINREAIEAALQDIVRDLPGGPLIERLVAINVPAGPVNTIRDIYADPFIEARGVVHRFVREDGVEIPTVAFPGKFSATPTDYRYRPPQVGEHTRELLGDWLGLSDADFAGLEEKGAVRQR*