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SCN18_14_9_16_R4_B_scaffold_16770_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(38..1000)

Top 3 Functional Annotations

Value Algorithm Source
hemolysin D n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3BFAB similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 290.0
  • Bit_score: 396
  • Evalue 2.50e-107
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJL35034.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 290.0
  • Bit_score: 391
  • Evalue 6.70e-106
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 298.0
  • Bit_score: 378
  • Evalue 1.20e-102

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
GCCGCCTCGGTCAGCCCCACCGAGGCCACCTCCGGGTCGGTGAAGGTCACCTGCGGCACGGCGCGGTGGTCGGCCGTCGCGACGTGCGCCCCCCAGGGCGCGTCGTCGACGGGGCGGCCCGCGGCGCGTGCGGCGATCGCGTCGACCGGCGCGCTCGAGCGGCGTTACAGCGAATTGGTCAAGATCAACGCGATCGCCAAGCAGGATTACGACAATGCGGTGACGCAGGCGCAGCAGGCGCGCGCCGATGTCGCCGCACAGCAGGCCGCGCTGCGCACCGCCGAGATCGATCTGGCGCGGACCACGATCCGCGCGCCGATCGCCGGGCGGATCGGGCGTTCCGACTTCACCACCGGCGCTTTGGTCACCGCGGCGCAGGCCAATGCGCTGACGACGATCCAGCGGCTCGATCCGATCTATGTCGACGTGCAGCAATCGAGCGCCGAGGTGCTCAAGCTGCGCCAGCGGATCATGGCCGGCGAGATCGCCCGTGAGGGCGGCGCGGCGCGCGTCCAGCTCAAGCTCGAGGATGGCTCGACCTATCCGGTCGAGGGCGAACTGAAGTTCACCGACGTCACGGTCGATCCGACCACCGGCAGCCAGGCGATCCGCATCCGCTTCGCCAATCCGAACGGCCTGTTGCTGCCGGGGATGTATGTCCGCGCCCAGCTGGTCGAAGGCACGAAGGCCGAGGGCCTGCTGGTGCCACAGCGCGCAGTGGGTCGCGATGAGAGCGGCCATGCGACGGTGATGGTCGTTGGCAAGGACAGCAAGCTCGAACAGCGCGCGATCGAGGCGGCGCGGACGGTGGGCGATTCGTGGCTCGTCTCCAGCGGTCTCAAGCCCGGCGACCGGGTGGTGATGGAAGGCGCGATGATGCTGCGGCCGGGGATGCCGGTGAAGCCGGTGCCGTTCGCGCCCAAGGCTGCCGCGGGCAAGCCGGCTCCGGCGCAGGCGAAGTAA
PROTEIN sequence
Length: 321
AASVSPTEATSGSVKVTCGTARWSAVATCAPQGASSTGRPAARAAIASTGALERRYSELVKINAIAKQDYDNAVTQAQQARADVAAQQAALRTAEIDLARTTIRAPIAGRIGRSDFTTGALVTAAQANALTTIQRLDPIYVDVQQSSAEVLKLRQRIMAGEIAREGGAARVQLKLEDGSTYPVEGELKFTDVTVDPTTGSQAIRIRFANPNGLLLPGMYVRAQLVEGTKAEGLLVPQRAVGRDESGHATVMVVGKDSKLEQRAIEAARTVGDSWLVSSGLKPGDRVVMEGAMMLRPGMPVKPVPFAPKAAAGKPAPAQAK*