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SCN18_14_9_16_R4_B_scaffold_16180_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(3..1007)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 335.0
  • Bit_score: 655
  • Evalue 3.40e-185
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Sphingomonas melonis RepID=UPI000367A620 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 335.0
  • Bit_score: 655
  • Evalue 2.40e-185
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 335.0
  • Bit_score: 650
  • Evalue 1.70e-184

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Taxonomy

CN-SCN_Sphingomonas_18x → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGAACGAGATTACCCCTTTCGCGAACCCGATCGCGAAGCCCGAGACCTTCGATCAGATCCAGATCGGCATCGCATCGCCGGATCGCATCCGCTCGTGGTCGTTCGGCGAGATCAAGAAGCCGGAGACGATCAACTACCGCACGTTCAAGCCCGAGCGTGACGGCCTGTTCTGCGCGCGCATCTTCGGCCCGATCAAGGAGTACGAATGCTTGTGCGGCAAGTACAAGCGCATGAAGTACAAGGGCATTGTCTGCGAAAAGTGCGGCGTGGAGGTGACCGTCTCCAAGGTCCGCCGCGAGCGCATGGGCCATATCGAGCTGGCCGCGCCGGTCGCGCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGCATCGGCCTGCTGCTCGACATGCAGCTCAAGCAGCTCGAGCGCGTGCTGTATTTCGAAGCCTATATCGTCATCGAGCCGGGCCTCACCCCGCTTGAGAAGTATCAGCTTCTCACCGAGGACGAGCTGCTCGAAGCGCAGGACGAATATGGCGAGGACGCCTTCTCCGCCGGGATCGGCGCAGAGGCCGTGCGCGTCATGCTCGAAAGCCTCGATCTCGAAGGCGAGAAGACGCAGCTTCTGGAAGAACTCGCGACCACCAAGTCCGAGCTCAAGCCCAAGAAGATCATCAAGCGCCTGAAGGTCGTCGAGAGCTTCCTCGAATCCGGCAACCGCCCGGAGTGGATGATCCTCGAGGTGATCCCGGTGATCCCGCCCGAGCTGCGCCCGCTGGTGCCGCTGGACGGTGGCCGCTTCGCGACCTCCGACCTCAACGACCTGTATCGCCGCGTCATCAACCGCAACAATCGTCTGAAGCGGCTGATGGAGCTGCGTGCGCCGGACATCATCGTCCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTCGACGCCTTGTTCGACAACGGCCGTCGCGGCCGGACGATCACCGGCGCCAACAAGCGTCCGTTGAAGTCGCTCGCCGACATGCTCAAGGGCAAA
PROTEIN sequence
Length: 335
MNEITPFANPIAKPETFDQIQIGIASPDRIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKEYECLCGKYKRMKYKGIVCEKCGVEVTVSKVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMQLKQLERVLYFEAYIVIEPGLTPLEKYQLLTEDELLEAQDEYGEDAFSAGIGAEAVRVMLESLDLEGEKTQLLEELATTKSELKPKKIIKRLKVVESFLESGNRPEWMILEVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRMLQEAVDALFDNGRRGRTITGANKRPLKSLADMLKGK