ggKbase home page

SCN18_25_1_16_R3_B_scaffold_5563_4

Organism: SCN18_25_1_16_R3_B_Nitrosospira_56_5

partial RP 28 / 55 BSCG 33 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: 3088..3450

Top 3 Functional Annotations

Value Algorithm Source
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 121.0
  • Bit_score: 209
  • Evalue 1.80e-51
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4) similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 120.0
  • Bit_score: 198
  • Evalue 8.30e-49
D-alanine--D-alanine ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLA9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 121.0
  • Bit_score: 205
  • Evalue 1.80e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
TTGAATAACAAGGAATTTGGGAAAGTCGCGGTTCTGCTGGGCGGGCGTTCGGCCGAGCGCGAGATATCCCTACAAAGCGGGGCAGCGGTACTCGATGCGCTACGCCGGAGGAACGTCGACGCCCATCCGTTCGATCCTTCCGAGCTTCCCATTCAAGCCCTTTTGCACCAGGGTTTCGATCGGGCTCATATCTGCCTCCATGGACGCTATGGGGAGGACGGCACCGTCCAGGGCGCCCTGGAACTCATGGGACTGCCTTATACCGGCAGTGGCGTGCTGGCGAGCGCGCTGGCAATGGATCAATGGCGGACCAAGTTGTTATGGCAGGCCGTGGGCATCAGGACGCCACGCCATGTTCTGCTC
PROTEIN sequence
Length: 121
LNNKEFGKVAVLLGGRSAEREISLQSGAAVLDALRRRNVDAHPFDPSELPIQALLHQGFDRAHICLHGRYGEDGTVQGALELMGLPYTGSGVLASALAMDQWRTKLLWQAVGIRTPRHVLL