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SCN18_25_1_16_R3_B_scaffold_6652_3

Organism: SCN18_25_1_16_R3_B_Nitrosospira_56_5

partial RP 28 / 55 BSCG 33 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: 1381..2784

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 467.0
  • Bit_score: 874
  • Evalue 3.80e-251
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 467.0
  • Bit_score: 860
  • Evalue 2.00e-247
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DXS_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 467.0
  • Bit_score: 860
  • Evalue 6.90e-247

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Taxonomy

SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGTATCCACTGCTTGACACCATCATCACCCCTTCAAAATTGCGGGCGCTGGAACGCAGGATGTTGCCGCAGCTTGCCGACGAGTTGCGCCAGTTCCTGGTTGAATCGGTTGCCAGGACAGGTGGCCACCTGTCTTCGAACCTGGGCACCGTAGAGCTGACGATCGCGTTGCACTATGTATTCAACACGCCCCATGATCGCCTGGTATGGGACGTTGGACATCAGACCTATGCGCACAAAATATTGACCGGGCGCCGCGAAGGCATGAAAAAATTGCGCATGCATGGCGGAATCGCTGGATTTCCGCGGCGCGATGAAAGCGAATACGATGCTTTCGGCACGGCGCATTCCAGTACTTCCATCAGTGCCGCTCTCGGGATGGCTGTCGCCTCGCAGCAGGAAGGAAAGAGCAGACGCGTGGTGGCCGTGATCGGCGATGGCGCGATGAGTGCGGGGATGGCGTTCGAGGCATTGAACAACGCCGGAGCGATGACCACCGATCTGCTGGTGATCCTGAATGATAACGACATGTCCATCTCGCGCCCCGTTGGCGCTCTCAACAATTACCTCGCAAGACTCATGTCCGGGCAATTCTACGCCACCGCACGCCGTGCCGGAGAAAAGATGCTGGGAGTCGTGCCCCCTGTGCTGGAACTGGCCAAGCGCGCCGAAGAGCATGTCAAAGGCATGGTGACGCCCAGCACGATGTTCGAGGAGTTCGGATTTAATTATATCGGGCCTATCGATGGCCATGACCTCGATGTGCTGGTAAGCACACTCAACAATATCAAACACCTGGATGGTCCGCAATTCCTTCACGTGGTGACGCGCAAGGGCGCTGGCTACAAAGCCGCGGAGGACGATCCCATTCTTTATCACGGCGTGGCCAAGTTTAACCCCGATGCCGGCATTCTGCCCAAAGGCGGCGGCAAGCCGTCATATACCCAGATTTTTGGCGACTGGTTATGCGACATGGCGGCATTGGACCAGCGCTTGGTCGGGATCACCCCGGCAATGCGGGAGGGCTCGGGACTCGTGAAATTCTCCGAAGAGTACCCTGATCGATATTTCGACGTAGGTATCGCCGAGCAGCATGCCGTAACTTTTGCCGCGGGCCTTGCTTGCGACGGCATCAAGCCGGTTGTCGCCATTTATTCCACTTTCCTGCAACGGGCCTACGATCAGTTGATTCATGATGTCGCAATACAGAATCTTCCGGTCGTGTTCGCCATCGATCGGGCGGGGTTGGTGGGAGCGGACGGTCCTACCCATGCAGGCAGCTTTGATTTGACTTACCTGCGATGCATACCGAATATGACCGTTCTGGTTCCTGCCGATGAAAATGAATGCCGCCAGATGCTTTATACCGCATTCCAGCTGGATACACCGACGGCCGTGCGGTAG
PROTEIN sequence
Length: 468
MYPLLDTIITPSKLRALERRMLPQLADELRQFLVESVARTGGHLSSNLGTVELTIALHYVFNTPHDRLVWDVGHQTYAHKILTGRREGMKKLRMHGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVASQQEGKSRRVVAVIGDGAMSAGMAFEALNNAGAMTTDLLVILNDNDMSISRPVGALNNYLARLMSGQFYATARRAGEKMLGVVPPVLELAKRAEEHVKGMVTPSTMFEEFGFNYIGPIDGHDLDVLVSTLNNIKHLDGPQFLHVVTRKGAGYKAAEDDPILYHGVAKFNPDAGILPKGGGKPSYTQIFGDWLCDMAALDQRLVGITPAMREGSGLVKFSEEYPDRYFDVGIAEQHAVTFAAGLACDGIKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNMTVLVPADENECRQMLYTAFQLDTPTAVR*