ggKbase home page

SCN18_25_1_16_R3_B_scaffold_8766_1

Organism: SCN18_25_1_16_R3_B_Nitrosospira_56_5

partial RP 28 / 55 BSCG 33 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: comp(1..522)

Top 3 Functional Annotations

Value Algorithm Source
Murein-DD-endopeptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 172.0
  • Bit_score: 254
  • Evalue 6.50e-65
Murein-DD-endopeptidase {ECO:0000313|EMBL:CCU61139.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 172.0
  • Bit_score: 254
  • Evalue 9.10e-65
peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 174.0
  • Bit_score: 224
  • Evalue 1.20e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGAAAAAAAAGATTACTCTTGCGGTATTTGTCACGTTCGCTTTAGCCTGCGCCACCATTGCACAAGCGGGCGGATTGCATCTCAGATCGCATGCGGCGCTGATCCTGGACGCCGAGCATGGACGCATTCTCTTTAGCAAGAACCCGGATAACATTGTGCCGATCGCGTCCATTACCAAGCTGATGACCGCAATTGTTGTCCTCGATGCAAAATTGCCTCTGAAAGAAGGCGTTGTTATCGAGCAGGCCGATGTGGATGTCATCAAGAATACCCGTTCACGATTGCGCGTTGGCACGCGCCTCTCTCGCTATGACCTTTTGCGCCTGGCCCTGATGTCTTCCGAGAATCGCGCCGCCGCGGCGCTTGGGCGCGCTTACCCGGGCGGCATCAACGCATTCGTCGAAGCGATGAACAACAAGGCGTTCGAGCTGGGCATGGGTAACAGTTATTTCGTTGACTCGACCGGCTTGAACAGGAAGAACGTTTCAACAGCCAGGGATCTCGCAAAACTGGTCGAGGCC
PROTEIN sequence
Length: 174
MKKKITLAVFVTFALACATIAQAGGLHLRSHAALILDAEHGRILFSKNPDNIVPIASITKLMTAIVVLDAKLPLKEGVVIEQADVDVIKNTRSRLRVGTRLSRYDLLRLALMSSENRAAAALGRAYPGGINAFVEAMNNKAFELGMGNSYFVDSTGLNRKNVSTARDLAKLVEA