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SCN18_25_1_16_R3_B_scaffold_6734_5

Organism: SCN18_25_1_16_R3_B_Nitrosospira_56_5

partial RP 28 / 55 BSCG 33 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: 2439..2804

Top 3 Functional Annotations

Value Algorithm Source
Putative TonB-dependent receptor n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q605U6_METCA similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 130.0
  • Bit_score: 119
  • Evalue 2.30e-24
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 130.0
  • Bit_score: 119
  • Evalue 6.50e-25
Putative TonB-dependent receptor {ECO:0000313|EMBL:AAU91589.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 130.0
  • Bit_score: 119
  • Evalue 3.20e-24

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Taxonomy

SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGCCGCCTGAGCGCATTGACCCAGTGGAGAAACAGGATTCACCTGCTGCCGTCCAACTCGCCGATACCGTCTCGCAGAATGCCTTGCGTCCCGCTAAACCACGAAACGACGGCGCAACCGCGCAACCCGTGGTCAAGCTCAAGGAAGTGGTGGTACTGGGCAAAGAGCGCGGGACCAGCCTTGTAGGCGAAACCCAATCCGCGTCCCAGGGATTCATAGGCCAGGAGCAGATTAAAAATCGCCCGCTGTCACGCGTCGCCGAAGTGGTTGAGTTCATTCCCGGCATGATTGCTACCCAGCATAGCGGCGATGGAAAAGCCAACCAGTATTTTCTGCGTGGATTCAACCTCGATCATGGCACCGAT
PROTEIN sequence
Length: 122
MPPERIDPVEKQDSPAAVQLADTVSQNALRPAKPRNDGATAQPVVKLKEVVVLGKERGTSLVGETQSASQGFIGQEQIKNRPLSRVAEVVEFIPGMIATQHSGDGKANQYFLRGFNLDHGTD