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SCN18_25_1_16_R3_B_scaffold_4450_1

Organism: SCN18_25_1_16_R3_B_Nitrosospira_56_5

partial RP 28 / 55 BSCG 33 / 51 MC: 4 ASCG 9 / 38 MC: 2
Location: 1..690

Top 3 Functional Annotations

Value Algorithm Source
Flagellar L-ring protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 213.0
  • Bit_score: 333
  • Evalue 1.40e-88
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 213.0
  • Bit_score: 334
  • Evalue 7.00e-89
flgH; flagellar basal body L-ring protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 211.0
  • Bit_score: 296
  • Evalue 4.30e-78

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Taxonomy

SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GGCCTATCCGCCCGGTGCACCCGGCCATTGAAAAAGGCATTCTCCGGCATCGTCGTGCTGACAGCTCTTTCCGGCTGCGTGACCCTGCCGGCACCGCCCGCTATCGTACAACATCCCCTGACCACGGTTACCCCGCAGCCGGAACCGGCGCCCAGCAATGGCGCCATCTTCCAGGCGGGAACGCACGACCGGCCATTATTCGAAGACAGGCGGGCGCGCATGGTGGGGGACATCCTGATCATTGTGCTCAACGAGCAAAACAATGCACGCAAGCAGTCGAACAGCAGTGTCAGCAAGAACGGTTCCCTCAATTTCGGTGTTCCGCCCATCGTATTCGGCGTGCCCATCACCAAGAAGGTGGAACTCGGCGCTTCTTCCGACAACAAGTACGACGGGAATGGCCAGGCAGCCTCCAACAACAATTTCACGGGCACTATCACTGTCACGGTGCTGAAAGTGCTGCCTAACCGCAACCTGCTGGTCAGCGGGGAGAAGCAGATCGCCATGACCCAGGGCACCGAATACATTCGCTTTTCCGGTGTGGTGCGGCCTGAGTCCGTCATCAATAACACCGTGTCCTCGGTGCAGGTGGCGGATGCGAAAATCGAATACAAGGCCAATGGCTACATCGACGAGGCCCAGACGATGGGCTGGCTTTCGCGGTTTTTCCTGACTGTCTCTCCATTTTGA
PROTEIN sequence
Length: 230
GLSARCTRPLKKAFSGIVVLTALSGCVTLPAPPAIVQHPLTTVTPQPEPAPSNGAIFQAGTHDRPLFEDRRARMVGDILIIVLNEQNNARKQSNSSVSKNGSLNFGVPPIVFGVPITKKVELGASSDNKYDGNGQAASNNNFTGTITVTVLKVLPNRNLLVSGEKQIAMTQGTEYIRFSGVVRPESVINNTVSSVQVADAKIEYKANGYIDEAQTMGWLSRFFLTVSPF*