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SCN18_25_1_16_R3_B_scaffold_416_14

Organism: SCN18_25_1_16_R3_B_SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13_39_37

near complete RP 50 / 55 BSCG 49 / 51 ASCG 12 / 38
Location: 7472..8614

Top 3 Functional Annotations

Value Algorithm Source
IncF plasmid conjugative transfer pilus assembly protein TraB id=1888594 bin=GWE2_Gammaproteobacteria_37_16 species=Vibrio vulnificus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 382.0
  • Bit_score: 217
  • Evalue 1.90e-53
protein TraB similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 214.0
  • Bit_score: 201
  • Evalue 3.10e-49
Tax=GWE2_Gammaproteobacteria_37_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 382.0
  • Bit_score: 217
  • Evalue 2.70e-53

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Taxonomy

SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13 → SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13 → SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13 → SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13 → SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13 → Gammaproteobacteria

Sequences

DNA sequence
Length: 1143
ATGACAGATGCTCAAATAGTAAAAATCAAACAAATTGCTTTATTTGCAGGGTTACTAGGAGCATTAACGTTATTAATTCATTCATTTTTATCTTGGACGGTTGGTAAGCCTAATGCTGCTCAAGATAAAAGAGCAGTGATTCAGGCTATACCTTCAATTACTAAAAATATCGATGACAGTAGTATATGGATGCAAAGGATTGAGGGAAAGTTGAAAAACTCAGAAAAGAGAAATGCGGAACTAGAAAAAGAGCTGGAGGGGCAACGCGTCCAGATGGACGCAATAATCAAAGGACAAGAAATTCTTTTAGAAGAAATGTCACAAAAACTTGAATTCATTTCACAACAAGCAGCTGAACAACAAGAGAATACAAATCAATTAGATAAAAACATGCAAAATCATAATGCTTGGCCTCCTGGAGAGAATACGACTGATGAGTTTGCTTATGGGGCTGGTAATCCTCCTGCAATATTTTCTACCTCGTTAAAGCTAAGCGAAAAAAACAAGAATCTGAAAATAAACTATATCCCAGCTGGTACTTTTGTTCGGGCGGTCATTTTAGGTGGTGTAGATGCCTCTGCGAGCATTTCTTCTCAAAGCGAACCAAGGCCCGTTTTATTACGATTAGTTGATTTGGGTGTTTTACCAAATCATGCAAGAGCTAACATTCAGGATTGTCATATTATTGCTGCAGTTTACGGAGATATCTCTAGTGAGCGTGCTTATGCGCGAACGGAGAGAATTAGCTGCACTTTAAAGAATGGAAAAGTATTTGAATCTTCGCTCGAAGGCTATATTGCAGGCGAGGATGGGAAAGACGGTGTCAGGGGCAAAGTTATCAGGAGAGAAGGTGATCTATTATGGAACAGTTTCTTTGCTGGCGCAGTTTCTGGTTTAGGTAAAGGAATGTCTCAAGGTTTGGGAACCACTTCAATTTCTCCATTGGGTTCAACCACCACAACCACTGGATCAGATGTGCTTAAGTCAGGCGCATATAGCGGAATTGGGGAGGGGGCTGATCGTTTGCAAAAGTACTTTATTGAAAGAGCTGAGCAGTATCAGCCTGTTATTCAGATAGCCGCGGGTAGAGAGATCACTGTCGTTTTTACAAAAGGATTAACGTTAGATGGAATCAAACTTTGA
PROTEIN sequence
Length: 381
MTDAQIVKIKQIALFAGLLGALTLLIHSFLSWTVGKPNAAQDKRAVIQAIPSITKNIDDSSIWMQRIEGKLKNSEKRNAELEKELEGQRVQMDAIIKGQEILLEEMSQKLEFISQQAAEQQENTNQLDKNMQNHNAWPPGENTTDEFAYGAGNPPAIFSTSLKLSEKNKNLKINYIPAGTFVRAVILGGVDASASISSQSEPRPVLLRLVDLGVLPNHARANIQDCHIIAAVYGDISSERAYARTERISCTLKNGKVFESSLEGYIAGEDGKDGVRGKVIRREGDLLWNSFFAGAVSGLGKGMSQGLGTTSISPLGSTTTTTGSDVLKSGAYSGIGEGADRLQKYFIERAEQYQPVIQIAAGREITVVFTKGLTLDGIKL*