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SCN18_30_10_14_R1_B_scaffold_2031_20

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: comp(20816..21661)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=2 Tax=Sphingobium RepID=T0GU26_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 230.0
  • Bit_score: 329
  • Evalue 2.60e-87
RND transporter {ECO:0000313|EMBL:KER34714.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 230.0
  • Bit_score: 329
  • Evalue 3.60e-87
heavy metal efflux system protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 233.0
  • Bit_score: 295
  • Evalue 8.90e-78

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGTCAAAGCGGTCTATCCTTCTCGCGGGCATTGCTGTGGCCGCATTGGCAGTCGCCGGCTGGTGGTGGCTCGCCGCCCCCACCGGCACTGCGCCCTCACCAGCGACGGAGCAGGCCGCAGGCGCCGCCTCGCCCGGCATTCTGAAGGTTGAGGACGAGCGCGCCGCTGCGCTCGGCATCCGGCTGGAAGCGGCGAGCGCGGCGGATGAAGCGCCGCTGGGCGTGGTCCCAGCCATGATCGAGCCTCCGGCCAATGCACGCGTTGCCGTGGCGGCGACCTTCCCCGGCGTGGTGACGCGCACGCTGGTGGTGGAGGGCGACTCGGTCCGCCAGGGGCAACCGCTCGCGATCATCTCCAGCCGGGACGTGCTGACGATGGGCGCGGACCTCGCGCGGGCCGACGCACGGCTGGGCGTCGCGCGCTCGAACGCTGCCCGGCTCTCACAGCTCAGCCGCGAGGGCATCATCGCCGGCGCCCGCGCAGACCAGGCCAACGCGATCGCCGCCGAAGCGCGGGCGGATGTCTCGGAAAAGGCGCGCATCCTGCGGATGGTCAATGGCCAGGGCAGCAGTGGCTCCTATACGCTCACGGCCCCGATCGCCGGACGCGTGACCAGCGCAACCATCCAGGCCGGCAATCCGGTGGATGGCACGACCGCGCCTTATGTGATTGATGCGGCAGGCCGTGGGCTCGACGATCGATCCCGCGACGCGCTCGGCAAGCCTGAAGGCCCAGATTCCGGCCCGGCCCGGCATTGTCGCCGGCCGCACGACCAGCCTCGCCATTTCCGGCCCGGCGCCTGCGGGCGCCGCGAGCGTGCCGTCTGCCGCCGTGGCGGTGCTTGA
PROTEIN sequence
Length: 282
MSKRSILLAGIAVAALAVAGWWWLAAPTGTAPSPATEQAAGAASPGILKVEDERAAALGIRLEAASAADEAPLGVVPAMIEPPANARVAVAATFPGVVTRTLVVEGDSVRQGQPLAIISSRDVLTMGADLARADARLGVARSNAARLSQLSREGIIAGARADQANAIAAEARADVSEKARILRMVNGQGSSGSYTLTAPIAGRVTSATIQAGNPVDGTTAPYVIDAAGRGLDDRSRDALGKPEGPDSGPARHCRRPHDQPRHFRPGACGRRERAVCRRGGA*