ggKbase home page

SCN18_30_10_14_R1_B_scaffold_4198_4

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: comp(1435..2328)

Top 3 Functional Annotations

Value Algorithm Source
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 299.0
  • Bit_score: 453
  • Evalue 2.30e-124
Methionyl-tRNA formyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ38_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 299.0
  • Bit_score: 453
  • Evalue 1.60e-124
fmt; methionyl-tRNA formyltransferase similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 299.0
  • Bit_score: 453
  • Evalue 4.60e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGGCACGCCCGATTTCGCGGTGCCGACGCTCGACGCGCTGTTCGTGGCAGGGCACGAGATCGCGGCCGTCTATACCCAGCCGCCGCGCCCGGCCGGCCGGGGCAAGGCGCCGCGCCCCAGCCCGGTGCAGGCACGCGCGGAGGCGCTGGGCCTGCCCGTGCGCACCCCGCTCACCCTGCGTGACGAAGCCGAGCAGGCCAGCTTCGACGATCTGGACGCGGATGTGGCCGTGGTCGCCGCTTATGGGCTCATCCTGCCGCTGCCGGTGCTGCATGCCCCGCGCCTCGGCTGCCTCAATGTGCACGCCTCGCTCCTGCCGCGCTGGCGGGGAGCCGCGCCGATCCACCGCGCCATCCTCGCGGGCGACGCGGAAACCGGCGTCACCATCATGGCGATGGGCAAGGGACTCGACACCGGGCCGATGCTGGCCACCGTGCGCACGCCGGTCGACGGCAAGACCACGGGTGAGCTGACGCACGAACTCGCGGTGAGCGGCGCCGCGCTGATGGTGCAGGTGCTCGCCAATATCGGCGCTTATCCGCCCTTCGTGCAGCCGGAGGACGGCGTGCTCTATGCCGACAAGATCGACAAGGCCGAGAGCCATATCGACTTCGCAGCGGGCCCTGTGCAGGCCGAGCGGCAGGTGCGCGCGTTCAATCCCGCGCCCGGCGCCTGGGCCAGCCTGAACGGCGAGCGGATCAAGATCCTCGCCGCGACTGTGGAGCCGCAAGCCGGCGCGCCCGGCGAAGTGCTGGATGAGGCGCTGCTGATCGGCTGCGGTCCGGCGGGCTCCCTGCGGCCTACGCTCGTCCAGCGCGCCGGCAAGGGCGCGATGAGCACGGCCGAGCTGCTGCGCGGCTTCCCCATCCCCGCCGGTACCGTGCTCGGATGA
PROTEIN sequence
Length: 298
MGTPDFAVPTLDALFVAGHEIAAVYTQPPRPAGRGKAPRPSPVQARAEALGLPVRTPLTLRDEAEQASFDDLDADVAVVAAYGLILPLPVLHAPRLGCLNVHASLLPRWRGAAPIHRAILAGDAETGVTIMAMGKGLDTGPMLATVRTPVDGKTTGELTHELAVSGAALMVQVLANIGAYPPFVQPEDGVLYADKIDKAESHIDFAAGPVQAERQVRAFNPAPGAWASLNGERIKILAATVEPQAGAPGEVLDEALLIGCGPAGSLRPTLVQRAGKGAMSTAELLRGFPIPAGTVLG*