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SCN18_30_10_14_R1_B_scaffold_2686_5

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: 3744..5303

Top 3 Functional Annotations

Value Algorithm Source
Hypothetical transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 503.0
  • Bit_score: 715
  • Evalue 3.10e-203
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 503.0
  • Bit_score: 715
  • Evalue 8.70e-204
Hypothetical transcriptional regulator {ECO:0000313|EMBL:BAH56689.1}; TetR family transcriptional regulator {ECO:0000313|EMBL:BAK68261.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 503.0
  • Bit_score: 715
  • Evalue 4.30e-203

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGGATATCGCCAAGGCCGTGCCGGCTGGGCGGATAGTCGCGGTCGGCCGTGGGGCCGACAGGGCCGCCATCGTGGTGAAGGCACTCGCCCTTCTTGATGAGCAGGGGCTGGCAGGCTGCACGATCGAGGCCGTGGCGGCGTGGTCGGGCCTCGATGCCGCTCACATCAAGGAGCATTTTGCCGATCGGGACGCTTTGCTCGTCGCGATGGCCGAGGCCATGGCGCTCGCGGCGCCCGCAGTGACGGCGGAAGGCTGGCGCGATCAGCTTGCCGGCCGCGCGCTGGCAGGGCGGGACGTCATGCTCAGCCGGCGCGACGGCGGCCTGCTGTTCGCGCAGATGCCGACGATCTTCCCGGTCGGCGGATCGGCGCATGATTGCGTGCCCGCGATGTGCGCCGCCGGCTTCAGCCTGGCCGACGCCCGCGCCGCGATGCTGCTCGTCGATCGCTTCACCATCGGCTGCGCGCTCGCAGAACAGAATGCGGCGGGCACGGGCGAGGGGCGCGCGAGCTTCGAGGCGCAGCTCGACGTGGTGCTGGCGGGCATCGCCGCGACGCAGCCCGCCGGGATCGCGACGCGGCGGGATGAGCGGCAGAGCAGCTTCCAGTCCCGGCTCTGGGTGTTCCTGCGCGATGCGCGCGAAAGCGCCAACATCTCCTTCGCGCGCACCGCCCATGTGAACGAGCTGGACCGGCGCATCCTGCTGCTGCTGCTCGCGCAGGGGCCGATGACGCTCGCGGTCATTTCCATGGCATGCGGCGTCGACAAGGCGCAGATCAGCCGCGCGATCAAGCGCATGGGCGAGGTCTCCCTGCTTTCCCGCGGCGGCATCCGCAGCCCGATCCGCCTCAGCACGACCGGGCGTCAGCTCGCCGAGCGGCTGCAGAGGCAGGCGGAGCTGCGCAACCGCGAGCTGACGTTCGGCATCAGCGACGAGCAGATCGTCGCCCTGTTCGGCGTGCTGGACATCCTCCTCGGCCGCGCCATCGCGCTGTTCGAGCAGGAGCGGCGGCTCAGCTCGGCTCATAACCAGCGCGAGCAGGTCGATTTCCAGGATCTGGTCGATGAGGGCCTGCCGGACGAGAATGGCGTCGCCGTCGACCGATCGCGCGTGCTGCCGCCGTTCGTGACGCTCTGCTCCTACATGCTGCGCGGCGGGGCGCTGGCGCACAAGCGCCGGACGGGGCTGTCGAACTTCGAGAGCTGGGTGCTCGACGAGGTGTGCAAGAACCCGCCGATCAGCTGGCCCCAGCTCGTGCTCGCGCTCTACCGTGACCAGAGCCAGGCGGGCCGCACGGTCAATCATCTGATCGACATCGGCCTTGTCGAGCGCACCGGCAAACCCGGCCGCCGCCACGGCTTCTTCGCGCCGACCGCAGAGGGCCAGCGGATCAGCGATCTCATCGACGAGACGCAGGTCCGCCGCAGCGAGTTCCTGTTCCAGGGCATCCCGGCCGAGCAGCTCGATATCTTCATGACCGCCTTCGAGACTCTCGCGCGCAATGCCGAGGTGCAGGTGGCGCGGGAGCGGGCCATTCAGGAGATGGATCGGGACTGA
PROTEIN sequence
Length: 520
MDIAKAVPAGRIVAVGRGADRAAIVVKALALLDEQGLAGCTIEAVAAWSGLDAAHIKEHFADRDALLVAMAEAMALAAPAVTAEGWRDQLAGRALAGRDVMLSRRDGGLLFAQMPTIFPVGGSAHDCVPAMCAAGFSLADARAAMLLVDRFTIGCALAEQNAAGTGEGRASFEAQLDVVLAGIAATQPAGIATRRDERQSSFQSRLWVFLRDARESANISFARTAHVNELDRRILLLLLAQGPMTLAVISMACGVDKAQISRAIKRMGEVSLLSRGGIRSPIRLSTTGRQLAERLQRQAELRNRELTFGISDEQIVALFGVLDILLGRAIALFEQERRLSSAHNQREQVDFQDLVDEGLPDENGVAVDRSRVLPPFVTLCSYMLRGGALAHKRRTGLSNFESWVLDEVCKNPPISWPQLVLALYRDQSQAGRTVNHLIDIGLVERTGKPGRRHGFFAPTAEGQRISDLIDETQVRRSEFLFQGIPAEQLDIFMTAFETLARNAEVQVARERAIQEMDRD*