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SCN18_30_10_14_R1_B_scaffold_5982_4

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: 4833..5897

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 354.0
  • Bit_score: 646
  • Evalue 1.60e-182
choline dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 354.0
  • Bit_score: 646
  • Evalue 4.40e-183
Choline dehydrogenase {ECO:0000313|EMBL:BAK65958.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 354.0
  • Bit_score: 646
  • Evalue 2.20e-182

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
TTGACCGCGCGCAACGGCAAGCGCTGCTCGGCGGCGGTCGCCTTCCTGCACCCGGTGATGGGCCGGCCGAACCTGACGGTGGAGCTGCGCGCGATGACGACGCGCATCCTGTTCGAGGGCAAGCGCGCCGTGGGCGTCGAGTTCCGCCAGCACGACCGCATCCGCGTGGTGAAGGTGCGCAAGGAAGTCATCCTCGCGGCGGGCGCGGTGGAGAGCCCCAAGCTGCTGGAAATTTCCGGCATCGGCCAGGGGAATCTGATCCAGTCGCTCGGCGTGCCGCTGGTACATGAGCTGCCCGGCGTGGGCGAAAACATGCAGGATCATTACATGATCGGCTGCCAGGCGCGCCTGAAGCCGGGCACGCCCTCGGTCAACTCGATGGCGAGCGGGCTGCCGCTGGTCGGACAGGTGCTCAAATATGGCGTGACCCGCAAGGGGCTGCTGAGCTACGCGGTGGCGCATGGCTGTGCCTTCGTGCGCTCGCGCGAGGGGCTGGAAACGCCGGACATCCAGATCCACACCATGGCCGCCTCGATGGACCTGGAGGTACTGAACGCCAAGCAGCAGCTCGCGCTGGAGAAGGAGCCGGGCCTCGCCTCCAATCCGTGCCAGCTGCGCCCGGAATCGCGCGGCTCCATCCACGCCCGCTCGCCGGACGGCATGGAGCCGCCGAAGATCGTGCCGAATTATCTGCAGGACCCGATCGACCAGCAGATGGCGGTCACGCAGCTCAAGCTCATCCGCAAGATCTGGCAGCAGCCCTCCGTGGCGAAGTATCTGGCCGGCCCCGATCCGTTCGGCGAGACGGAGGACCAGATGTTCTTCTACGCGCAGGTTGCGGGCGGCACGCTGTATCACGCGGTCGGCACCGCTCGCATGGGCTCGGACCCCAAGGCGGTGGTCGATGCGCGGCTGCGCGTCCATGGCGTGCAGGGGCTGCGTGTGGTCGACGCGTCGATCATGCCCAAGATCGTCTCGGGCAACACCAATGCCGCGACCATCATGATCGGCGAGAAAGGCTCGCAGATGATCTTGGAGGATGCGAAGGAACTGGCGCCGGCCTGA
PROTEIN sequence
Length: 355
LTARNGKRCSAAVAFLHPVMGRPNLTVELRAMTTRILFEGKRAVGVEFRQHDRIRVVKVRKEVILAAGAVESPKLLEISGIGQGNLIQSLGVPLVHELPGVGENMQDHYMIGCQARLKPGTPSVNSMASGLPLVGQVLKYGVTRKGLLSYAVAHGCAFVRSREGLETPDIQIHTMAASMDLEVLNAKQQLALEKEPGLASNPCQLRPESRGSIHARSPDGMEPPKIVPNYLQDPIDQQMAVTQLKLIRKIWQQPSVAKYLAGPDPFGETEDQMFFYAQVAGGTLYHAVGTARMGSDPKAVVDARLRVHGVQGLRVVDASIMPKIVSGNTNAATIMIGEKGSQMILEDAKELAPA*