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SCN18_10_11_15_R5_B_scaffold_79_12

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(9041..9868)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I646_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 271.0
  • Bit_score: 281
  • Evalue 6.00e-73
Virulence regulon transcriptional activator VirF {ECO:0000313|EMBL:CEJ10973.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 275.0
  • Bit_score: 296
  • Evalue 2.50e-77
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 271.0
  • Bit_score: 281
  • Evalue 1.70e-73

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GTGGCACGGACGGACACGCGAAATTTTTCGAAATATTGGCAGGATCCCGATATTCCAGGGTTGAGCCTTCTGTGCGCCGACTTCACGACGCATGACTATGCGCCGCATACGCACGACGCCTATGTGATCGCCGTGACCGAGCAGGGCGGCGCCGAATTCAAGAGTCGTGGACTTGTCGCCCGGGCGCACAATTCGGCGCTGCTCGTCTTCAATCCTCAGGAACCGCATTCAAGCCGGCTGGGCGCGAGTGATCGGTGGCGCTATCGCGCGTTCTACCTGACCGACGGCGCGATGCGGTGCGTGCAGCGGGGCTTGGGCATCGAGCACGCCCCGTATTTCTGCTCCAACCTGTTTCGTGACGAGGAACTGATCGCGGATTTCGCCGTCTTGCATCGTTCGATCGAGAACAATGAAAGCGCCTTCGCGGTGAGGAGCCAGCTCTATCTCGCCTTCGGCAAACTCTTCCAGCGCCACAGCAGCCCCTTCTTCCGCGCGGAGAAGGCCACTTACGAACAGGCGCTGACCGATCGGATCGTCGCCTATATGCGCGAGCATTATGCCCAGGACATCTCGCTCGATACGCTCGCCGCGTCGTTCAGCCTGACACCGTTCCAGATGATCCGCTGCTTCAACCGGACAGTCGGGCTGCCACCTCATAGCTATCTGACGCAGATCCGGCTGCGCGTCGCCTGTCGCCTGCTCAGGCAAGGCAGGAGTTTCGCGGTCTCCGCGCATGCGGTGGGGTTTTATGATCAGAGCGCATTCAACAAGCACTTCAAGCGCGCCTACGGAATCACGCCTCGCCAGTTCCTGGCTGCTGCCGCTTGA
PROTEIN sequence
Length: 276
VARTDTRNFSKYWQDPDIPGLSLLCADFTTHDYAPHTHDAYVIAVTEQGGAEFKSRGLVARAHNSALLVFNPQEPHSSRLGASDRWRYRAFYLTDGAMRCVQRGLGIEHAPYFCSNLFRDEELIADFAVLHRSIENNESAFAVRSQLYLAFGKLFQRHSSPFFRAEKATYEQALTDRIVAYMREHYAQDISLDTLAASFSLTPFQMIRCFNRTVGLPPHSYLTQIRLRVACRLLRQGRSFAVSAHAVGFYDQSAFNKHFKRAYGITPRQFLAAAA*